Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TAF9BP1-201ENST00000396646 746 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AL035419.1-201ENST00000397037 564 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AL121977.1-201ENST00000401636 979 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDH1Q08174 PSMD8P1-201ENST00000436275 769 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 OR3B1P-201ENST00000437536 893 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 MTND1P30-201ENST00000441241 901 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 RPL23AP76-201ENST00000441860 458 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 CDC42P2-201ENST00000448566 569 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 RHEBP2-201ENST00000450289 600 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 KATNBL1P6-201ENST00000453433 915 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 OR7E62P-201ENST00000456741 477 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 NDUFB4P1-201ENST00000462398 381 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 BNIP3P41-201ENST00000503774 571 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 FABP5P5-201ENST00000515537 406 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDH1Q08174 SAA3P-201ENST00000533267 365 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC105275.2-201ENST00000567907 711 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 MIR5192-201ENST00000579892 92 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC090616.1-201ENST00000583895 447 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC018714.1-201ENST00000605028 208 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC007684.1-201ENST00000609671 477 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC011477.1-204ENST00000623416 1325 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC107980.1-201ENST00000558671 3355 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 AC069222.1-201ENST00000608028 3360 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.17□□□□□ -1.26
PCDH1Q08174 AL391262.1-201ENST00000556558 1992 ntBASIC7.17□□□□□ -1.26
PCDH1Q08174 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC241584.2-201ENST00000637142 2090 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC019072.1-201ENST00000604535 1551 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 RBMX2P2-201ENST00000257020 946 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL078621.1-201ENST00000272567 768 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 RN7SKP36-201ENST00000363997 312 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 MIR181C-201ENST00000384881 110 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL079341.1-201ENST00000404701 1207 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC010385.1-201ENST00000412374 256 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC009413.1-201ENST00000414823 399 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 PAICSP7-201ENST00000419829 962 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 RPS27AP7-201ENST00000422792 455 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 IPMKP1-201ENST00000425988 855 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 OR5AW1P-201ENST00000426334 1006 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 SNX18P14-201ENST00000429308 574 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDH1Q08174 ATP5F1P1-201ENST00000433775 569 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH1Q08174 USP9YP29-201ENST00000445112 563 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH1Q08174 CDC42P1-201ENST00000456658 548 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 RPL5P13-201ENST00000462840 709 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms