Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.65□□□□□ -1.51
CDH11P55287 AC114876.1-201ENST00000490962 1366 ntBASIC5.65□□□□□ -1.51
CDH11P55287 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH11P55287 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH11P55287 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH11P55287 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH11P55287 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 RPL11P4-201ENST00000332269 436 ntBASIC5.64□□□□□ -1.51
CDH11P55287 TRAV35-201ENST00000390462 330 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AL445238.1-204ENST00000400311 463 ntBASIC5.64□□□□□ -1.51
CDH11P55287 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH11P55287 FAM204CP-201ENST00000424489 642 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC092651.1-201ENST00000426110 312 ntBASIC5.64□□□□□ -1.51
CDH11P55287 GTF3AP6-201ENST00000432585 986 ntBASIC5.64□□□□□ -1.51
CDH11P55287 MED28P4-201ENST00000433137 572 ntBASIC5.64□□□□□ -1.51
CDH11P55287 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.64□□□□□ -1.51
CDH11P55287 snoU13.29-201ENST00000459370 104 ntBASIC5.64□□□□□ -1.51
CDH11P55287 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AC008945.1-201ENST00000505144 499 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC112484.3-201ENST00000505910 329 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC010343.2-201ENST00000510162 224 ntBASIC5.64□□□□□ -1.51
CDH11P55287 SNORA74.1-201ENST00000516320 180 ntBASIC5.64□□□□□ -1.51
CDH11P55287 Vault.2-201ENST00000516519 98 ntBASIC5.64□□□□□ -1.51
CDH11P55287 RNA5SP441-201ENST00000516809 88 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC011853.1-201ENST00000518911 454 ntBASIC5.64□□□□□ -1.51
CDH11P55287 CYCSP25-201ENST00000525280 316 ntBASIC5.64□□□□□ -1.51
CDH11P55287 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH11P55287 RPA2P3-201ENST00000533268 770 ntBASIC5.64□□□□□ -1.51
CDH11P55287 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH11P55287 AC078878.1-201ENST00000539832 958 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH11P55287 AP000619.2-201ENST00000546014 969 ntBASIC5.64□□□□□ -1.51
CDH11P55287 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH11P55287 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH11P55287 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH11P55287 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH11P55287 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 AC027229.1-201ENST00000583887 253 ntBASIC5.64□□□□□ -1.51
CDH11P55287 NPIPB1P-202ENST00000588786 828 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AC004890.3-201ENST00000605566 1095 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AL021368.1-201ENST00000607490 540 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC239803.2-201ENST00000610161 430 ntBASIC5.64□□□□□ -1.51
CDH11P55287 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AC006213.5-201ENST00000619673 288 ntBASIC5.64□□□□□ -1.51
CDH11P55287 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 MIR7159-201ENST00000620587 66 ntBASIC5.64□□□□□ -1.51
CDH11P55287 AP001153.1-201ENST00000641024 338 ntBASIC5.64□□□□□ -1.51
CDH11P55287 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH11P55287 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDH11P55287 AC020656.2-201ENST00000613291 5309 ntBASIC5.64□□□□□ -1.51
CDH11P55287 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH11P55287 AL353743.3-201ENST00000442109 1468 ntBASIC5.64□□□□□ -1.51
CDH11P55287 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AC004656.1-201ENST00000568479 4951 ntBASIC5.63□□□□□ -1.51
CDH11P55287 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH11P55287 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 RNA5SP279-201ENST00000365513 117 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AC003045.1-201ENST00000398779 713 ntBASIC5.63□□□□□ -1.51
CDH11P55287 VN1R20P-201ENST00000425215 966 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AL365220.1-201ENST00000432923 399 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 RN7SL552P-201ENST00000462094 276 ntBASIC5.63□□□□□ -1.51
CDH11P55287 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH11P55287 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH11P55287 CYP4F27P-201ENST00000514557 494 ntBASIC5.63□□□□□ -1.51
CDH11P55287 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH11P55287 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH11P55287 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms