Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PSMA6P1-201ENST00000400275 741 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 DHFRP2-201ENST00000414224 547 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 RPSAP32-201ENST00000432681 526 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC096632.2-201ENST00000438139 1239 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 SOCS5P1-201ENST00000440415 949 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 OR2L9P-201ENST00000444456 913 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 POU5F1P5-201ENST00000445059 658 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 REG1CP-206ENST00000447469 496 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC097359.1-201ENST00000447946 463 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 OR6C72P-201ENST00000451403 892 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 RPL12P31-201ENST00000478433 450 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 CR383656.1-201ENST00000484916 377 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC114728.1-201ENST00000488289 483 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 GUSBP9-201ENST00000510138 584 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC026782.2-201ENST00000510845 636 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 IGKV2-19-201ENST00000518132 283 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 OR6M2P-201ENST00000529831 871 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 DUX4L52-201ENST00000549363 777 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 HNRNPCP1-201ENST00000556181 766 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 AC138207.8-204ENST00000579588 527 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 AL356608.1-201ENST00000610034 820 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AL158062.1-201ENST00000619632 745 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 AP001153.1-201ENST00000641024 338 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 AC083837.1-201ENST00000565297 2994 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 Z95114.1-201ENST00000624264 14574 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
HNF4AP41235 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HNF4AP41235 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HNF4AP41235 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 VN1R20P-201ENST00000425215 966 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 MTCO1P51-201ENST00000427672 1060 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC092349.1-201ENST00000504903 310 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC027026.1-201ENST00000532323 742 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.03□□□□□ -1.44
HNF4AP41235 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 AC090651.1-201ENST00000567865 634 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AC027229.1-201ENST00000583887 253 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AC005828.7-201ENST00000607331 556 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AC010998.3-201ENST00000613871 631 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 HDAC1P2-201ENST00000453661 1398 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 AP001541.1-201ENST00000623322 1904 ntBASIC6.03□□□□□ -1.44
HNF4AP41235 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
HNF4AP41235 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HNF4AP41235 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.02□□□□□ -1.44
HNF4AP41235 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
HNF4AP41235 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.02□□□□□ -1.44
HNF4AP41235 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.02□□□□□ -1.44
HNF4AP41235 AL359091.1-201ENST00000449048 1734 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms