Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU1-134P-201ENST00000362935 165 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FDFT1P37268 AC092865.3-201ENST00000425390 1026 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.1□□□□□ -1.43
FDFT1P37268 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.1□□□□□ -1.43
FDFT1P37268 RPS27P20-201ENST00000492051 246 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.1□□□□□ -1.43
FDFT1P37268 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.1□□□□□ -1.43
FDFT1P37268 AC108103.1-201ENST00000511286 446 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 OR4A42P-201ENST00000531397 938 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.1□□□□□ -1.43
FDFT1P37268 NPM1P5-201ENST00000557228 838 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.1□□□□□ -1.43
FDFT1P37268 AL135999.3-201ENST00000610501 812 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AL109924.4-201ENST00000623089 670 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AL357562.1-201ENST00000624911 609 ntBASIC6.1□□□□□ -1.43
FDFT1P37268 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FDFT1P37268 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
FDFT1P37268 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FDFT1P37268 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
FDFT1P37268 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
FDFT1P37268 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 RN7SKP77-201ENST00000363261 353 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 AL034417.1-201ENST00000399343 800 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 RN7SKP146-201ENST00000410242 334 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 AC010240.2-201ENST00000445363 1205 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 FTLP8-201ENST00000446770 267 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 AL603882.1-201ENST00000463059 681 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 AC079080.1-201ENST00000479841 822 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 AC005017.1-201ENST00000482002 490 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.09□□□□□ -1.43
FDFT1P37268 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 MRPS5P3-201ENST00000515577 166 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 OR7E158P-201ENST00000524483 910 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.09□□□□□ -1.43
FDFT1P37268 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 SMIM12P1-201ENST00000603004 274 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 AC073389.3-201ENST00000609434 935 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 AL512652.1-201ENST00000619006 500 ntBASIC6.09□□□□□ -1.43
FDFT1P37268 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.09□□□□□ -1.43
FDFT1P37268 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FDFT1P37268 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
FDFT1P37268 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.09□□□□□ -1.44
FDFT1P37268 MTCO1P28-201ENST00000574177 1528 ntBASIC6.09□□□□□ -1.44
FDFT1P37268 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
FDFT1P37268 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.09□□□□□ -1.44
FDFT1P37268 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FDFT1P37268 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
FDFT1P37268 RBMY1HP-201ENST00000382759 1389 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.08□□□□□ -1.44
FDFT1P37268 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FDFT1P37268 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FDFT1P37268 AC090220.1-201ENST00000593078 1699 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
FDFT1P37268 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.08□□□□□ -1.44
FDFT1P37268 RN7SKP184-201ENST00000362348 333 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 RNA5SP110-201ENST00000362638 115 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.08□□□□□ -1.44
FDFT1P37268 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FDFT1P37268 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
FDFT1P37268 RN7SKP17-201ENST00000411242 351 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.08□□□□□ -1.44
FDFT1P37268 AL035422.1-201ENST00000414193 397 ntBASIC6.08□□□□□ -1.44
FDFT1P37268 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FDFT1P37268 AL354868.1-201ENST00000417077 482 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 1398.9 ms