Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP002370.1-201ENST00000528055 1602 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL133243.2-201ENST00000610331 1621 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 RN7SKP269-201ENST00000365545 319 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 RNU6-40P-201ENST00000384254 107 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.54□□□□□ -1.36
SLC6A4P31645 RNA5SP431-201ENST00000410312 120 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 AC106883.1-201ENST00000418805 562 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 ARAFP1-201ENST00000422172 605 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AC092865.3-201ENST00000425390 1026 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 NPM1P25-201ENST00000429734 854 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 MTND2P2-201ENST00000434633 945 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 SOCS5P1-201ENST00000440415 949 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 MTND1P26-201ENST00000440488 538 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 POU5F1P5-201ENST00000445059 658 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SLC6A4P31645 RPS3AP53-201ENST00000454716 778 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AL133351.3-201ENST00000454998 193 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.54□□□□□ -1.36
SLC6A4P31645 OR51A1P-201ENST00000511110 946 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 HSD3BP3-201ENST00000514706 994 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AC036111.2-201ENST00000533247 901 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 PCA3_2.1-201ENST00000612507 409 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AC245389.2-201ENST00000616023 576 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AP003789.1-201ENST00000617737 605 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 AC242843.1-201ENST00000618702 573 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 CASC19-274ENST00000642018 970 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC6A4P31645 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC6A4P31645 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC6A4P31645 AL359976.1-201ENST00000418655 3528 ntBASIC6.54□□□□□ -1.36
SLC6A4P31645 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC6A4P31645 Z93929.1-201ENST00000418200 1475 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 CYP2G2P-201ENST00000594920 1485 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC6A4P31645 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
SLC6A4P31645 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC6A4P31645 AL157831.2-201ENST00000564681 3095 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SLC6A4P31645 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SLC6A4P31645 AL050305.1-201ENST00000399993 1230 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AL139805.1-201ENST00000407837 289 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 MIR1282-201ENST00000408865 101 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 OR13Z1P-201ENST00000416141 834 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AC092570.3-201ENST00000420113 693 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 NPM1P26-201ENST00000426339 738 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 RPSAP65-201ENST00000429660 595 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC6A4P31645 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC6A4P31645 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC6A4P31645 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC6A4P31645 AC093166.3-201ENST00000448785 303 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC6A4P31645 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC6A4P31645 RN7SL170P-201ENST00000487098 295 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AC106800.3-201ENST00000511389 308 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.53□□□□□ -1.36
SLC6A4P31645 OR7E13P-201ENST00000526052 910 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.53□□□□□ -1.36
SLC6A4P31645 NPIPB14P-203ENST00000532298 987 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 AC084121.1-201ENST00000533882 835 ntBASIC6.53□□□□□ -1.36
SLC6A4P31645 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms