Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 RANP1-206ENST00000455094 651 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.15□□□□□ -1.1
RFX1P22670 CHIAP1-201ENST00000456220 995 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC110749.1-201ENST00000462007 357 ntBASIC8.15□□□□□ -1.1
RFX1P22670 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 GLRXP3-201ENST00000470810 321 ntBASIC8.15□□□□□ -1.1
RFX1P22670 SETP11-201ENST00000473027 690 ntBASIC8.15□□□□□ -1.1
RFX1P22670 RPS10P28-201ENST00000480396 498 ntBASIC8.15□□□□□ -1.1
RFX1P22670 F11-205ENST00000492972 1204 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 AC109445.1-201ENST00000512356 383 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 PTTG3P-201ENST00000521862 606 ntBASIC8.15□□□□□ -1.1
RFX1P22670 BCAS2P1-201ENST00000528022 632 ntBASIC8.15□□□□□ -1.1
RFX1P22670 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC8.15□□□□□ -1.1
RFX1P22670 AC008126.1-201ENST00000549019 480 ntBASIC8.15□□□□□ -1.1
RFX1P22670 CHCHD3P2-201ENST00000550751 639 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.15□□□□□ -1.1
RFX1P22670 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.15□□□□□ -1.1
RFX1P22670 AC067773.1-201ENST00000603284 1094 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC073648.5-201ENST00000603502 305 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AL136363.2-201ENST00000604173 851 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC008385.1-201ENST00000604421 355 ntBASIC8.15□□□□□ -1.1
RFX1P22670 BNIP3P4-201ENST00000604946 565 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC015540.1-201ENST00000615828 501 ntBASIC8.15□□□□□ -1.1
RFX1P22670 FKBP1AP4-201ENST00000631775 336 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
RFX1P22670 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 AC110716.2-201ENST00000563865 3945 ntBASIC8.15□□□□□ -1.11
RFX1P22670 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.15□□□□□ -1.11
RFX1P22670 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
RFX1P22670 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 AL355852.1-201ENST00000454081 1771 ntBASIC8.15□□□□□ -1.11
RFX1P22670 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 HSPD1P1-201ENST00000503199 1726 ntBASIC8.15□□□□□ -1.11
RFX1P22670 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RFX1P22670 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 AL161891.1-201ENST00000621575 4636 ntBASIC8.14□□□□□ -1.11
RFX1P22670 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC005832.2-201ENST00000538921 1430 ntBASIC8.14□□□□□ -1.11
RFX1P22670 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RFX1P22670 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RFX1P22670 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RFX1P22670 OR1L1-202ENST00000373686 1083 ntBASIC8.14□□□□□ -1.11
RFX1P22670 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 MT-TH-201ENST00000387441 69 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RNU6-244P-201ENST00000391028 104 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 NUS1P4-201ENST00000401550 585 ntBASIC8.14□□□□□ -1.11
RFX1P22670 ZNF37CP-201ENST00000406795 241 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC004986.1-201ENST00000414855 607 ntBASIC8.14□□□□□ -1.11
RFX1P22670 GTF2IP23-201ENST00000423746 351 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RNF11P2-201ENST00000427702 440 ntBASIC8.14□□□□□ -1.11
RFX1P22670 Z83313.1-201ENST00000433780 718 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AL590103.1-201ENST00000434488 307 ntBASIC8.14□□□□□ -1.11
RFX1P22670 FTH1P16-201ENST00000435241 552 ntBASIC8.14□□□□□ -1.11
RFX1P22670 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.14□□□□□ -1.11
RFX1P22670 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 AC092641.1-201ENST00000440229 772 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RPS10P14-201ENST00000440748 502 ntBASIC8.14□□□□□ -1.11
RFX1P22670 TPTE2P6-202ENST00000445572 1007 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 MTCYBP1-201ENST00000454315 1119 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RPL5P24-201ENST00000463742 885 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RN7SL180P-201ENST00000466769 294 ntBASIC8.14□□□□□ -1.11
RFX1P22670 RN7SL861P-201ENST00000473793 285 ntBASIC8.14□□□□□ -1.11
RFX1P22670 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.14□□□□□ -1.11
RFX1P22670 NPY6R-201ENST00000503807 1112 ntBASIC8.14□□□□□ -1.11
RFX1P22670 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.14□□□□□ -1.11
RFX1P22670 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms