Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 AL591767.3-201ENST00000554632 525 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 FXNP1-201ENST00000555153 337 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 YWHAZP1-201ENST00000556286 722 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC027176.2-201ENST00000559166 746 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 RN7SL208P-201ENST00000577964 296 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 BNIP3P24-201ENST00000593398 557 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC091057.3-201ENST00000602684 733 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC064807.4-201ENST00000607201 407 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC006386.1-201ENST00000619436 415 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AL445493.3-201ENST00000619568 477 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC026422.1-201ENST00000623961 452 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC073342.3-201ENST00000624211 193 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 AC019226.2-201ENST00000625973 424 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC099654.8-201ENST00000637757 681 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A1P12109 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A1P12109 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC140479.2-201ENST00000421567 3130 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 AC012321.1-201ENST00000561622 1588 ntBASIC7.24□□□□□ -1.25
COL6A1P12109 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A1P12109 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A1P12109 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A1P12109 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A1P12109 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A1P12109 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
COL6A1P12109 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 MAPK10-383ENST00000642032 3390 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 DDX18P6-201ENST00000450119 1997 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 RNA5SP110-201ENST00000362638 115 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 RNA5SP477-201ENST00000362639 119 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 RNA5SP242-201ENST00000364171 118 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 AL607077.1-201ENST00000401718 499 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 MTCO2P8-201ENST00000412213 658 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AL512504.1-201ENST00000415494 778 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A1P12109 DUTP4-201ENST00000424782 475 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A1P12109 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 AL445528.1-201ENST00000426330 420 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 MED28P4-201ENST00000433137 572 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 MTCO2P20-201ENST00000437339 673 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 ATP5LP2-201ENST00000440646 311 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A1P12109 MTND2P22-201ENST00000444325 1033 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL6A1P12109 RN7SL629P-201ENST00000489622 285 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 PABPC1P1-201ENST00000506347 591 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 OR5H7P-201ENST00000514084 930 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 PRMT5P1-201ENST00000514351 598 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 MTND4LP31-201ENST00000514859 294 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 RFPL4AP3-201ENST00000515267 345 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 OR9L1P-201ENST00000529493 933 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.23□□□□□ -1.25
COL6A1P12109 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.23□□□□□ -1.25
COL6A1P12109 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A1P12109 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
COL6A1P12109 AC016180.1-201ENST00000567945 403 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AC106785.4-201ENST00000569492 412 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 SNORA70D-201ENST00000578836 135 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 RN7SL475P-201ENST00000583379 298 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AC009237.12-201ENST00000604755 742 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.23□□□□□ -1.25
COL6A1P12109 AC005393.1-201ENST00000617916 584 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 MIR6085-201ENST00000618314 110 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A1P12109 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL6A1P12109 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A1P12109 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 TATDN2P3-201ENST00000452855 3665 ntBASIC7.23□□□□□ -1.25
COL6A1P12109 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A1P12109 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A1P12109 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
COL6A1P12109 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A1P12109 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A1P12109 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
COL6A1P12109 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A1P12109 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A1P12109 MROH3P-201ENST00000435735 2676 ntBASIC7.22□□□□□ -1.25
COL6A1P12109 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A1P12109 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms