Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL137067.2-201ENST00000621202 131 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 KDM5DP1-201ENST00000622542 298 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC007347.2-201ENST00000623044 180 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC021766.1-201ENST00000624404 741 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC130304.1-201ENST00000622942 2385 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL1P09341 AL731532.2-201ENST00000623542 1953 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL1P09341 LINC01808-203ENST00000641932 1643 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CXCL1P09341 RPL11P3-201ENST00000395256 523 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RN7SKP166-201ENST00000410812 305 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 RPL12P10-201ENST00000413498 498 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RPL18AP14-201ENST00000417685 526 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 ACA64.4-201ENST00000459070 127 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 CBX5P1-201ENST00000468470 561 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RPL5P15-201ENST00000475870 897 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RN7SL326P-201ENST00000477493 296 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 RPL23AP40-201ENST00000487630 390 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 AC093870.1-201ENST00000506837 213 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 SCARNA11.1-201ENST00000516918 132 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 AL133399.1-201ENST00000527476 298 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC090424.1-201ENST00000535243 736 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 NF1P12-201ENST00000549593 583 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.55□□□□□ -1.68
CXCL1P09341 AC007346.2-201ENST00000564816 892 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL1P09341 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL1P09341 RN7SL311P-201ENST00000579858 306 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 MIR3936-201ENST00000584304 110 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.55□□□□□ -1.68
CXCL1P09341 AL137000.1-201ENST00000610528 1244 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 MIR6762-201ENST00000613340 86 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 AL355480.4-201ENST00000626823 69 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 AL132656.3-201ENST00000606384 1595 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL1P09341 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CXCL1P09341 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL1P09341 AL137141.1-201ENST00000624622 4836 ntBASIC4.55□□□□□ -1.68
CXCL1P09341 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CXCL1P09341 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CXCL1P09341 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 AL133243.2-201ENST00000610331 1621 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CXCL1P09341 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC019072.1-201ENST00000604535 1551 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CXCL1P09341 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CXCL1P09341 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 MIR1231-201ENST00000408101 92 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 RPS14P4-201ENST00000415880 418 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.54□□□□□ -1.68
CXCL1P09341 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CXCL1P09341 VN1R53P-201ENST00000429536 957 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 GAPDHP75-201ENST00000433910 943 ntBASIC4.54□□□□□ -1.68
CXCL1P09341 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.54□□□□□ -1.68
CXCL1P09341 AL139135.2-201ENST00000445040 433 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms