Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.53□□□□□ -1.52
SPTA1P02549 RPS26P13-201ENST00000419030 330 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.53□□□□□ -1.52
SPTA1P02549 LRRC37A14P-201ENST00000452297 462 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 RPL7P39-201ENST00000481157 744 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 EIF1P7-201ENST00000487533 337 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 AP001496.3-201ENST00000580230 913 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AL359704.2-201ENST00000604335 521 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC022106.1-201ENST00000612834 766 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPTA1P02549 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SPTA1P02549 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPTA1P02549 RN7SKP128-201ENST00000364270 303 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPTA1P02549 MIR192-201ENST00000384915 110 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 MIR223-201ENST00000385204 110 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 PPIAP10-201ENST00000438675 458 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 UBA52P7-201ENST00000486088 380 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 RN7SL808P-201ENST00000496066 299 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 PTTG3P-201ENST00000521862 606 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.52□□□□□ -1.53
SPTA1P02549 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 AC004014.2-201ENST00000623718 5122 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPTA1P02549 AL354868.1-201ENST00000417077 482 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 CNOT7P2-201ENST00000441051 832 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 NENFP3-201ENST00000503735 313 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 AC092865.1-201ENST00000544395 1023 ntBASIC5.52□□□□□ -1.53
SPTA1P02549 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.52□□□□□ -1.53
SPTA1P02549 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.52□□□□□ -1.53
SPTA1P02549 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.52□□□□□ -1.53
SPTA1P02549 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPTA1P02549 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.52□□□□□ -1.53
SPTA1P02549 AC119674.1-204ENST00000641348 1343 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 AL161912.4-201ENST00000623889 2468 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 RBMY1HP-201ENST00000382759 1389 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SPTA1P02549 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.51□□□□□ -1.53
SPTA1P02549 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.51□□□□□ -1.53
SPTA1P02549 OR4C1P-202ENST00000641065 1569 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 MAPK10-377ENST00000642006 2752 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.51□□□□□ -1.53
SPTA1P02549 AC127526.2-201ENST00000426436 775 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.51□□□□□ -1.53
SPTA1P02549 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 AL139156.3-201ENST00000454802 394 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SPTA1P02549 RPS3AP15-201ENST00000483874 781 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 BX510359.5-201ENST00000515651 304 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.51□□□□□ -1.53
SPTA1P02549 AC134698.5-201ENST00000519444 336 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.51□□□□□ -1.53
SPTA1P02549 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC5.51□□□□□ -1.53
SPTA1P02549 AC008115.4-201ENST00000619780 775 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.51□□□□□ -1.53
SPTA1P02549 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.51□□□□□ -1.53
SPTA1P02549 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPTA1P02549 AC024587.1-201ENST00000505925 2157 ntBASIC5.51□□□□□ -1.53
SPTA1P02549 AC009166.2-201ENST00000624410 2833 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms