Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 RNA5SP346-201ENST00000363541 121 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 ELOCP3-201ENST00000439303 348 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC027369.2-201ENST00000528030 440 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 NANOGNBP2-201ENST00000544753 553 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC233266.2-201ENST00000567067 528 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AF129408.1-201ENST00000608767 431 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 ABCA11P-202ENST00000504019 2110 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 RNU6-40P-201ENST00000384254 107 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL023284.3-201ENST00000407767 334 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 RN7SKP144-201ENST00000411108 279 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL713922.1-201ENST00000416477 747 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 PPIAP7-201ENST00000454070 489 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC104849.1-201ENST00000462623 405 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC084754.1-201ENST00000463466 464 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC103833.1-201ENST00000517442 172 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 COX6B1P4-201ENST00000519826 484 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 IGLV3-6-201ENST00000523937 250 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AP000620.1-201ENST00000527147 504 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC007346.1-201ENST00000569208 867 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 ZNF92P2-201ENST00000600543 1059 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC090912.3-201ENST00000609775 533 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 CR589904.2-201ENST00000612533 440 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC007683.2-201ENST00000624681 714 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 AC005261.6-201ENST00000623072 1387 ntBASIC7.18□□□□□ -1.26
VTA1Q9NP79 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.18□□□□□ -1.26
VTA1Q9NP79 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VTA1Q9NP79 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 MIR421-201ENST00000365696 85 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 RSL24D1P1-201ENST00000404972 493 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 HMGN1P20-201ENST00000411849 300 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 RAB9AP4-201ENST00000415230 609 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms