Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC023968.1-201ENST00000560719 475 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC012175.1-201ENST00000603755 531 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 LSM1P2-201ENST00000604911 322 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC004890.3-201ENST00000605566 1095 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC012511.1-201ENST00000608140 449 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC008833.1-201ENST00000611633 691 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AL136984.1-201ENST00000607611 1893 ntBASIC5.94□□□□□ -1.46
VPS33AQ96AX1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS33AQ96AX1 AC114876.1-201ENST00000490962 1366 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 FANCD2P2-201ENST00000437591 1400 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 RNU1-5P-201ENST00000362684 144 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OR13C3-201ENST00000374781 1108 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MRPL32P1-201ENST00000406301 247 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL139039.2-201ENST00000407436 479 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 RN7SKP221-201ENST00000410420 301 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 RPS20P25-201ENST00000412447 352 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL365220.1-201ENST00000432923 399 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL158214.1-201ENST00000444423 404 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC105918.1-201ENST00000474399 838 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 ATG10-AS1-201ENST00000504846 648 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC093664.1-201ENST00000511779 289 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 CYP4F27P-201ENST00000514557 494 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 RN7SKP34-201ENST00000516142 244 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SNORA70.17-201ENST00000516449 133 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SCARNA11.1-201ENST00000516918 132 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC092865.1-201ENST00000544395 1023 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SYPL1P2-201ENST00000582878 727 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC020916.2-201ENST00000591242 360 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MIR132-201ENST00000591554 101 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AC023206.1-201ENST00000605824 298 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL159169.2-201ENST00000610061 1269 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MIR6849-201ENST00000618543 69 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 OR7A1P-202ENST00000641542 1158 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL137141.1-201ENST00000624622 4836 ntBASIC5.93□□□□□ -1.46
VPS33AQ96AX1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VPS33AQ96AX1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC010894.1-201ENST00000313760 361 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 SNORD1C-201ENST00000363315 78 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL672167.2-201ENST00000377164 879 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 SNORA7A-201ENST00000384765 139 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC026310.1-201ENST00000396004 378 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms