Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CCDC65Q8IXS2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC65Q8IXS2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC65Q8IXS2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC65Q8IXS2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC65Q8IXS2 AC119674.1-202ENST00000641333 1860 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 OR10R3P-201ENST00000361688 942 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 RPSAP65-201ENST00000429660 595 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AL365220.1-201ENST00000432923 399 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 RPL5P7-201ENST00000444235 813 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC083795.1-201ENST00000491760 320 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 OR7E99P-201ENST00000505750 922 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC002519.2-203ENST00000567043 837 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC007346.1-201ENST00000569208 867 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 LSM1P2-201ENST00000604911 322 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC244100.4-201ENST00000617747 388 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC048341.3-201ENST00000619323 491 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 MTCO1P28-201ENST00000574177 1528 ntBASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC65Q8IXS2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 CAP1P2-201ENST00000417455 1409 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 SNORD1C-201ENST00000363315 78 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 MYL6P5-201ENST00000412707 459 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 CUBNP2-201ENST00000443534 1139 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 TIMM8BP2-201ENST00000445940 251 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 FTLP8-201ENST00000446770 267 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 OR52I1-201ENST00000450052 1050 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC091874.2-201ENST00000505889 720 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AL049779.3-201ENST00000557141 606 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC073333.2-201ENST00000603589 769 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC090181.3-201ENST00000624777 1514 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 AC022164.1-201ENST00000568767 2673 ntBASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC65Q8IXS2 RBMY1HP-201ENST00000382759 1389 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 THAP12P9-201ENST00000503971 2360 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 RNA5SP232-201ENST00000364144 119 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 GCNT1P4-201ENST00000404096 329 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC117434.1-201ENST00000419971 836 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms