Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.68□□□□□ -1.5
LIM2P55344 ATP5LP2-201ENST00000440646 311 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.68□□□□□ -1.5
LIM2P55344 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 SDC4P-201ENST00000453285 601 ntBASIC5.68□□□□□ -1.5
LIM2P55344 PPIAP27-201ENST00000453800 265 ntBASIC5.68□□□□□ -1.5
LIM2P55344 Z83838.1-202ENST00000456225 839 ntBASIC5.68□□□□□ -1.5
LIM2P55344 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.68□□□□□ -1.5
LIM2P55344 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.68□□□□□ -1.5
LIM2P55344 AC092865.4-201ENST00000477936 615 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AP002884.1-201ENST00000479691 655 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 RN7SKP238-201ENST00000516483 249 ntBASIC5.68□□□□□ -1.5
LIM2P55344 OR7E158P-201ENST00000524483 910 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AC110056.1-201ENST00000525759 911 ntBASIC5.68□□□□□ -1.5
LIM2P55344 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.68□□□□□ -1.5
LIM2P55344 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIM2P55344 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.68□□□□□ -1.5
LIM2P55344 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 MIR4271-201ENST00000582451 67 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 AC008507.3-201ENST00000585753 472 ntBASIC5.68□□□□□ -1.5
LIM2P55344 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIM2P55344 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIM2P55344 AL136097.3-201ENST00000611097 505 ntBASIC5.68□□□□□ -1.5
LIM2P55344 uc_338.26-201ENST00000612659 160 ntBASIC5.68□□□□□ -1.5
LIM2P55344 AC096708.4-201ENST00000620563 552 ntBASIC5.68□□□□□ -1.5
LIM2P55344 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LIM2P55344 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LIM2P55344 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIM2P55344 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.68□□□□□ -1.5
LIM2P55344 LYARP1-201ENST00000436977 1501 ntBASIC5.68□□□□□ -1.5
LIM2P55344 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LIM2P55344 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LIM2P55344 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LIM2P55344 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIM2P55344 IFIT1P1-201ENST00000400497 1449 ntBASIC5.67□□□□□ -1.5
LIM2P55344 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIM2P55344 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIM2P55344 VN1R12P-201ENST00000403778 876 ntBASIC5.67□□□□□ -1.5
LIM2P55344 OR2W4P-201ENST00000406496 926 ntBASIC5.67□□□□□ -1.5
LIM2P55344 SNRPEP6-201ENST00000407465 277 ntBASIC5.67□□□□□ -1.5
LIM2P55344 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 MYL6P5-201ENST00000412707 459 ntBASIC5.67□□□□□ -1.5
LIM2P55344 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.67□□□□□ -1.5
LIM2P55344 AC069154.1-201ENST00000432914 542 ntBASIC5.67□□□□□ -1.5
LIM2P55344 USP24P1-201ENST00000433802 779 ntBASIC5.67□□□□□ -1.5
LIM2P55344 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIM2P55344 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 AC005077.1-201ENST00000449226 375 ntBASIC5.67□□□□□ -1.5
LIM2P55344 ACA64.4-201ENST00000459070 127 ntBASIC5.67□□□□□ -1.5
LIM2P55344 AC104164.1-201ENST00000460282 590 ntBASIC5.67□□□□□ -1.5
LIM2P55344 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.67□□□□□ -1.5
LIM2P55344 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LIM2P55344 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.67□□□□□ -1.5
LIM2P55344 AC244502.2-201ENST00000543361 851 ntBASIC5.67□□□□□ -1.5
LIM2P55344 RPA2P1-201ENST00000556557 721 ntBASIC5.67□□□□□ -1.5
LIM2P55344 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.67□□□□□ -1.5
LIM2P55344 CYCSP38-201ENST00000559840 322 ntBASIC5.67□□□□□ -1.5
LIM2P55344 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.67□□□□□ -1.5
LIM2P55344 AC245014.3-201ENST00000618589 347 ntBASIC5.67□□□□□ -1.5
LIM2P55344 AL136228.1-201ENST00000622221 319 ntBASIC5.67□□□□□ -1.5
LIM2P55344 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 QRSL1P1-201ENST00000400977 1540 ntBASIC5.67□□□□□ -1.5
LIM2P55344 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 TTC41P-205ENST00000551270 3963 ntBASIC5.67□□□□□ -1.5
LIM2P55344 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LIM2P55344 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
LIM2P55344 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms