Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC083862.1-201ENST00000427378 1242 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 RPL3P11-201ENST00000434028 1146 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AL359265.1-201ENST00000440296 795 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 TPT1P1-201ENST00000458495 518 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 RPL5P3-201ENST00000493817 889 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 USP9YP2-201ENST00000504503 1000 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 ENPP7P3-201ENST00000509123 241 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL1P09341 USP9YP1-201ENST00000513521 1002 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 GAPDHP62-201ENST00000515313 990 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 RN7SKP242-201ENST00000515967 289 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 GTF2IP11-201ENST00000526931 420 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 AC005519.1-201ENST00000554490 601 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC026956.1-201ENST00000558741 396 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL1P09341 SYPL1P2-201ENST00000582878 727 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AL589863.1-201ENST00000595383 631 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC012175.1-201ENST00000603755 531 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AC099777.1-201ENST00000603779 1070 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AL035417.2-201ENST00000603887 796 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL1P09341 AC026367.3-201ENST00000619032 590 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 SAMMSON-227ENST00000642114 1199 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL1P09341 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 AC020633.1-201ENST00000468439 2247 ntBASIC4.57□□□□□ -1.68
CXCL1P09341 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL1P09341 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CXCL1P09341 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC005702.3-201ENST00000585345 1447 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC119674.1-202ENST00000641333 1860 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 MFSD8-219ENST00000641228 2559 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL1P09341 RNA5SP140-201ENST00000364524 92 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 RN7SKP191-201ENST00000364713 306 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 SNORA43.1-201ENST00000364863 140 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 RNA5SP427-201ENST00000365323 119 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 U3.52-201ENST00000384034 216 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC226101.1-201ENST00000401483 387 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 SETP22-201ENST00000412243 957 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 YWHAZP5-201ENST00000419975 730 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 RBMY2JP-201ENST00000425544 1059 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AP003385.1-201ENST00000426387 893 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 HSPE1P16-201ENST00000426640 348 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 CRIP1P1-201ENST00000427567 185 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 RPL6P24-201ENST00000445338 864 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC012512.1-201ENST00000446594 718 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC092421.1-201ENST00000448148 418 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AL121578.2-201ENST00000448797 447 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 RPS4XP12-201ENST00000461747 709 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AF305872.1-201ENST00000485217 471 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC137549.1-201ENST00000514243 533 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC093816.1-201ENST00000515076 913 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 SEPT10P1-201ENST00000517342 1162 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 IGLV3-24-201ENST00000517477 197 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL1P09341 TPRX1P1-201ENST00000557620 319 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AL163952.1-202ENST00000569625 600 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 OOSP1P2-201ENST00000579644 351 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 MIR4312-201ENST00000579909 76 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL1P09341 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL1P09341 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 RPS4XP21-201ENST00000603814 750 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC010632.3-201ENST00000611377 369 ntBASIC4.56□□□□□ -1.68
CXCL1P09341 AC024884.1-201ENST00000620583 399 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms