Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LDLRP01130 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.04□□□□□ -1.44
LDLRP01130 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.04□□□□□ -1.44
LDLRP01130 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 AC104966.1-201ENST00000467010 1464 ntBASIC6.03□□□□□ -1.44
LDLRP01130 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
LDLRP01130 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 RN7SKP229-201ENST00000410465 302 ntBASIC6.03□□□□□ -1.44
LDLRP01130 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 AC117434.1-201ENST00000419971 836 ntBASIC6.03□□□□□ -1.44
LDLRP01130 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.03□□□□□ -1.44
LDLRP01130 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.03□□□□□ -1.44
LDLRP01130 AMYP1-201ENST00000440059 1023 ntBASIC6.03□□□□□ -1.44
LDLRP01130 PFN1P11-201ENST00000445829 389 ntBASIC6.03□□□□□ -1.44
LDLRP01130 RPL7L1P3-201ENST00000455249 689 ntBASIC6.03□□□□□ -1.44
LDLRP01130 AL445687.2-201ENST00000458156 728 ntBASIC6.03□□□□□ -1.44
LDLRP01130 snoU13.29-201ENST00000459370 104 ntBASIC6.03□□□□□ -1.44
LDLRP01130 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.03□□□□□ -1.44
LDLRP01130 AC106872.4-201ENST00000510050 523 ntBASIC6.03□□□□□ -1.44
LDLRP01130 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.03□□□□□ -1.44
LDLRP01130 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.03□□□□□ -1.44
LDLRP01130 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.03□□□□□ -1.44
LDLRP01130 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.03□□□□□ -1.44
LDLRP01130 EIF1AXP2-201ENST00000555940 413 ntBASIC6.03□□□□□ -1.44
LDLRP01130 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.03□□□□□ -1.44
LDLRP01130 AC114477.1-201ENST00000605097 605 ntBASIC6.03□□□□□ -1.44
LDLRP01130 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.03□□□□□ -1.44
LDLRP01130 AC108865.2-201ENST00000606881 432 ntBASIC6.03□□□□□ -1.44
LDLRP01130 MIR7854-201ENST00000620068 65 ntBASIC6.03□□□□□ -1.44
LDLRP01130 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.03□□□□□ -1.44
LDLRP01130 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
LDLRP01130 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LDLRP01130 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.03□□□□□ -1.44
LDLRP01130 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LDLRP01130 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LDLRP01130 RNA5SP321-201ENST00000362722 111 ntBASIC6.02□□□□□ -1.45
LDLRP01130 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.02□□□□□ -1.45
LDLRP01130 GCNT1P4-201ENST00000404096 329 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AL512422.1-201ENST00000407033 553 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.02□□□□□ -1.45
LDLRP01130 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.02□□□□□ -1.45
LDLRP01130 RPL5P7-201ENST00000444235 813 ntBASIC6.02□□□□□ -1.45
LDLRP01130 RSL24D1P2-201ENST00000445584 366 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC007386.1-201ENST00000455212 582 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.02□□□□□ -1.45
LDLRP01130 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AC084754.1-201ENST00000463466 464 ntBASIC6.02□□□□□ -1.45
LDLRP01130 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 AC113398.2-201ENST00000507630 558 ntBASIC6.02□□□□□ -1.45
LDLRP01130 SNORD116-30-201ENST00000516468 85 ntBASIC6.02□□□□□ -1.45
LDLRP01130 RNU4-18P-201ENST00000516751 149 ntBASIC6.02□□□□□ -1.45
LDLRP01130 COX6B1P4-201ENST00000519826 484 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC026616.1-201ENST00000523157 525 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC025857.1-201ENST00000525252 377 ntBASIC6.02□□□□□ -1.45
LDLRP01130 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AL445383.1-201ENST00000554689 874 ntBASIC6.02□□□□□ -1.45
LDLRP01130 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AC011445.2-201ENST00000599274 173 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AP001267.4-201ENST00000602598 545 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC091133.5-201ENST00000603088 301 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.02□□□□□ -1.45
LDLRP01130 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 AL035425.4-201ENST00000624509 1063 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AC132825.8-201ENST00000640783 297 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AP001153.1-201ENST00000641024 338 ntBASIC6.02□□□□□ -1.45
LDLRP01130 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 KARSP1-201ENST00000451871 1752 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms