Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HERC6Q8IVU3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL132656.3-201ENST00000606384 1595 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 NEK2P4-201ENST00000425793 1329 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL512310.3-201ENST00000547023 1335 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 CDY11P-201ENST00000447168 1651 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL359195.2-201ENST00000623657 4412 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL513325.1-201ENST00000417716 1034 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RPS7P14-201ENST00000426405 583 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AP006222.1-205ENST00000450734 457 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RPSAP39-201ENST00000467439 883 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC068522.1-201ENST00000482895 345 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RN7SL561P-201ENST00000488553 281 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RNU6-1334P-201ENST00000516032 105 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RNA5SP434-201ENST00000516647 121 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 TMEM97P2-201ENST00000517841 403 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC087272.1-201ENST00000523624 533 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC079600.1-201ENST00000550326 297 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 SNRPGP1-201ENST00000553864 222 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 RN7SL787P-201ENST00000613000 284 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 MRPL57P1-201ENST00000621486 265 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AL133243.2-201ENST00000610331 1621 ntBASIC6.82□□□□□ -1.32
HERC6Q8IVU3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HERC6Q8IVU3 AC110597.1-201ENST00000562669 3176 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 CLCA3P-203ENST00000490028 2781 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 MIR1178-201ENST00000408396 91 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 RPS27AP2-201ENST00000457576 465 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC026348.1-201ENST00000462549 1053 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC135999.1-201ENST00000478962 479 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC006539.1-201ENST00000481419 501 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC063943.2-201ENST00000495697 534 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 ATP5LP3-201ENST00000514223 304 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 IGKV2-19-201ENST00000518132 283 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC112191.2-201ENST00000522428 333 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 MIR5095-201ENST00000578844 88 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 OR7E18P-201ENST00000592589 702 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 RNA5SP440-201ENST00000612665 119 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HERC6Q8IVU3 AC007485.2-201ENST00000623493 1667 ntBASIC6.81□□□□□ -1.32
HERC6Q8IVU3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HERC6Q8IVU3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HERC6Q8IVU3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.8□□□□□ -1.32
HERC6Q8IVU3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms