Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 OR5H2-201ENST00000355273 945 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 AL096711.1-201ENST00000404780 554 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 MIR1231-201ENST00000408101 92 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 GLUD1P9-201ENST00000420997 1173 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC018804.1-201ENST00000430381 618 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC096638.2-201ENST00000434965 711 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 MRPS21P3-201ENST00000436696 262 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 VN1R110P-201ENST00000438988 971 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.74□□□□□ -1.33
COL6A2P12110 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.74□□□□□ -1.33
COL6A2P12110 GOT2P2-201ENST00000450663 1251 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 RPL6P9-201ENST00000466502 859 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.74□□□□□ -1.33
COL6A2P12110 RN7SL187P-201ENST00000495587 303 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC093752.1-206ENST00000511823 336 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 RN7SKP11-201ENST00000517018 287 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.74□□□□□ -1.33
COL6A2P12110 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.74□□□□□ -1.33
COL6A2P12110 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.74□□□□□ -1.33
COL6A2P12110 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 FRG2IP-201ENST00000563581 781 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 MIR5705-201ENST00000579870 89 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AC005726.4-201ENST00000582858 458 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC092032.1-201ENST00000603090 165 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AL035410.2-201ENST00000604963 864 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AL139344.1-201ENST00000605228 195 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 AC015922.4-201ENST00000612568 690 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 AL356585.10-201ENST00000641883 123 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.74□□□□□ -1.33
COL6A2P12110 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.74□□□□□ -1.33
COL6A2P12110 AL359715.4-201ENST00000606629 1436 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.74□□□□□ -1.33
COL6A2P12110 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.74□□□□□ -1.33
COL6A2P12110 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL6A2P12110 SSXP3-201ENST00000442971 1300 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL6A2P12110 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL6A2P12110 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL6A2P12110 AL451142.1-201ENST00000375867 775 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL6A2P12110 MIR301B-201ENST00000390813 78 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 SNORD65-201ENST00000391079 73 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 RNA5SP53-201ENST00000391299 120 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 UBE2V1P11-201ENST00000411559 285 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AL663061.1-201ENST00000416625 580 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 PPIL1P1-201ENST00000423936 499 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC007365.2-201ENST00000428806 458 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 NIP7P1-201ENST00000433227 512 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.73□□□□□ -1.33
COL6A2P12110 AC073052.1-201ENST00000440417 714 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 SNX18P9-201ENST00000440580 835 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 ATP5C1P1-201ENST00000441945 895 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 RPS27P5-201ENST00000444247 244 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.73□□□□□ -1.33
COL6A2P12110 SULT1D1P-201ENST00000458020 882 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 NDUFB4P1-201ENST00000462398 381 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 RN7SL145P-201ENST00000469955 296 ntBASIC6.73□□□□□ -1.33
COL6A2P12110 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms