Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.79□□□□□ -1.64
CD28P10747 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 AL731532.1-201ENST00000623972 4236 ntBASIC4.79□□□□□ -1.64
CD28P10747 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD28P10747 SNORA43.1-201ENST00000364863 140 ntBASIC4.79□□□□□ -1.64
CD28P10747 RN7SKP81-201ENST00000365603 331 ntBASIC4.79□□□□□ -1.64
CD28P10747 UBE2V1P14-201ENST00000415815 558 ntBASIC4.79□□□□□ -1.64
CD28P10747 TRGV5P-201ENST00000419915 354 ntBASIC4.79□□□□□ -1.64
CD28P10747 RPL23AP19-201ENST00000436229 369 ntBASIC4.79□□□□□ -1.64
CD28P10747 GAPDHP23-201ENST00000444823 993 ntBASIC4.79□□□□□ -1.64
CD28P10747 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 AC005077.1-201ENST00000449226 375 ntBASIC4.79□□□□□ -1.64
CD28P10747 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CD28P10747 AC007998.1-201ENST00000474156 672 ntBASIC4.79□□□□□ -1.64
CD28P10747 PPIAP19-201ENST00000486414 492 ntBASIC4.79□□□□□ -1.64
CD28P10747 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.79□□□□□ -1.64
CD28P10747 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.79□□□□□ -1.64
CD28P10747 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.79□□□□□ -1.64
CD28P10747 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.79□□□□□ -1.64
CD28P10747 AC018558.5-201ENST00000565840 952 ntBASIC4.79□□□□□ -1.64
CD28P10747 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.79□□□□□ -1.64
CD28P10747 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 AP005119.1-201ENST00000580956 292 ntBASIC4.79□□□□□ -1.64
CD28P10747 AC090236.2-201ENST00000587933 1101 ntBASIC4.79□□□□□ -1.64
CD28P10747 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 OR7A8P-201ENST00000595427 913 ntBASIC4.79□□□□□ -1.64
CD28P10747 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.79□□□□□ -1.64
CD28P10747 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC4.79□□□□□ -1.64
CD28P10747 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CD28P10747 AP002512.4-202ENST00000641599 4530 ntBASIC4.79□□□□□ -1.64
CD28P10747 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 MTND5P12-201ENST00000502851 1449 ntBASIC4.79□□□□□ -1.64
CD28P10747 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD28P10747 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 AC011416.1-201ENST00000514947 1732 ntBASIC4.78□□□□□ -1.64
CD28P10747 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD28P10747 AC027279.1-201ENST00000568885 4284 ntBASIC4.78□□□□□ -1.64
CD28P10747 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CD28P10747 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD28P10747 TMSB4XP4-201ENST00000323496 618 ntBASIC4.78□□□□□ -1.64
CD28P10747 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD28P10747 MIR433-201ENST00000384837 93 ntBASIC4.78□□□□□ -1.64
CD28P10747 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD28P10747 SNORA17A-201ENST00000391185 133 ntBASIC4.78□□□□□ -1.64
CD28P10747 SEPT7P2-202ENST00000398921 823 ntBASIC4.78□□□□□ -1.64
CD28P10747 RN7SKP206-201ENST00000410823 293 ntBASIC4.78□□□□□ -1.64
CD28P10747 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.78□□□□□ -1.64
CD28P10747 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 AC016908.1-201ENST00000442571 1219 ntBASIC4.78□□□□□ -1.64
CD28P10747 ZNF619P1-201ENST00000446539 752 ntBASIC4.78□□□□□ -1.64
CD28P10747 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 SNX18P26-201ENST00000458433 740 ntBASIC4.78□□□□□ -1.64
CD28P10747 RN7SL174P-201ENST00000475578 289 ntBASIC4.78□□□□□ -1.64
CD28P10747 RN7SL193P-201ENST00000491708 276 ntBASIC4.78□□□□□ -1.64
CD28P10747 RN7SL101P-201ENST00000496350 279 ntBASIC4.78□□□□□ -1.64
CD28P10747 AC106872.4-201ENST00000510050 523 ntBASIC4.78□□□□□ -1.64
CD28P10747 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.78□□□□□ -1.64
CD28P10747 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD28P10747 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms