Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL133482.1-201ENST00000415988 498 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AL359265.1-201ENST00000440296 795 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 RPL38P3-201ENST00000484463 213 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC018645.1-201ENST00000505003 109 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 OR4A17P-201ENST00000526032 904 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AF186192.2-204ENST00000581667 524 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AL592504.1-201ENST00000605319 439 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 uc_338.33-201ENST00000614988 170 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AC006206.1-201ENST00000544842 3387 ntBASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VIPAS39Q9H9C1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
VIPAS39Q9H9C1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VIPAS39Q9H9C1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.09□□□□□ -1.44
VIPAS39Q9H9C1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VIPAS39Q9H9C1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 RPS21P1-201ENST00000434479 247 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 SNX18P9-201ENST00000440580 835 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 PFN1P6-201ENST00000476786 399 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC093870.1-201ENST00000506837 213 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC005519.1-201ENST00000554490 601 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC133552.4-201ENST00000576103 676 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 RN7SL311P-201ENST00000579858 306 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 AC010632.3-201ENST00000611377 369 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 OR9K1P-202ENST00000641111 3217 ntBASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VIPAS39Q9H9C1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 Y_RNA.209-201ENST00000364156 111 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 RN7SKP78-201ENST00000364711 318 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 RPL12P23-201ENST00000405880 490 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AL355994.1-201ENST00000424379 260 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 VN1R21P-201ENST00000426703 765 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC010240.2-201ENST00000445363 1205 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC092421.1-201ENST00000448148 418 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC006539.1-201ENST00000481419 501 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 ENPP7P11-201ENST00000505915 627 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 KHDC1P1-201ENST00000511053 508 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 Y_RNA.710-201ENST00000516975 110 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC022616.2-201ENST00000523185 300 ntBASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.07□□□□□ -1.44
VIPAS39Q9H9C1 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms