Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC026956.1-201ENST00000558741 396 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 LINC00556-201ENST00000569603 412 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC016542.2-201ENST00000624201 619 ntBASIC5.22□□□□□ -1.57
HLA-DMAP28067 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DMAP28067 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DMAP28067 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.21□□□□□ -1.57
HLA-DMAP28067 RPL31P11-201ENST00000426558 1558 ntBASIC5.21□□□□□ -1.57
HLA-DMAP28067 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DMAP28067 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DMAP28067 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DMAP28067 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 RN7SKP279-201ENST00000411383 298 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 CBX1P3-201ENST00000413296 527 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AHCYP8-201ENST00000425108 209 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC108479.1-201ENST00000431142 427 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 CUBNP2-201ENST00000443534 1139 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 RPS7P11-201ENST00000484240 586 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC124945.1-201ENST00000485133 188 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 RNU6-513P-201ENST00000516104 104 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 TMEM97P2-201ENST00000517841 403 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 TPM3P3-201ENST00000521343 354 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC009729.1-201ENST00000548873 1133 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 NF1P12-201ENST00000549593 583 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AL163952.1-202ENST00000569625 600 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 MIR4312-201ENST00000579909 76 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 COX6CP7-201ENST00000597056 208 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AL133481.2-203ENST00000607558 139 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 AL162574.1-201ENST00000615702 950 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 RAB28P4-201ENST00000622233 665 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC103703.1-201ENST00000634783 663 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AL022311.1-201ENST00000623726 19416 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DMAP28067 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMAP28067 AC024587.1-201ENST00000505925 2157 ntBASIC5.21□□□□□ -1.58
HLA-DMAP28067 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMAP28067 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 RNA5SP427-201ENST00000365323 119 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 RN7SKP1-201ENST00000365525 307 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 RPL11P3-201ENST00000395256 523 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 RNU2-5P-201ENST00000410533 180 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 AC009362.1-201ENST00000427253 406 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 FTLP19-201ENST00000433300 394 ntBASIC5.2□□□□□ -1.58
HLA-DMAP28067 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMAP28067 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms