Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 MIR6862-1-201ENST00000613016 70 ntBASIC6.56□□□□□ -1.36
NXF3Q9H4D5 AL021918.2-201ENST00000613415 194 ntBASIC6.56□□□□□ -1.36
NXF3Q9H4D5 MIR6862-2-201ENST00000614755 70 ntBASIC6.56□□□□□ -1.36
NXF3Q9H4D5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 RBPJP7-201ENST00000442803 1447 ntBASIC6.56□□□□□ -1.36
NXF3Q9H4D5 RBPJP5-201ENST00000449433 1447 ntBASIC6.56□□□□□ -1.36
NXF3Q9H4D5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NXF3Q9H4D5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC012254.3-201ENST00000591183 2117 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC063923.1-201ENST00000478982 1619 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 OR52B3P-201ENST00000314715 928 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 OR10R3P-201ENST00000361688 942 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 RNA5SP435-201ENST00000364044 108 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 MIR323B-201ENST00000385269 82 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC092642.1-201ENST00000392417 425 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AL031985.1-201ENST00000392713 418 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC245884.2-201ENST00000426257 404 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC104843.2-201ENST00000427666 297 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 RPL23AP19-201ENST00000436229 369 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC011476.1-201ENST00000466725 307 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC007998.1-201ENST00000474156 672 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 IGLVIV-64-201ENST00000518581 301 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 WBP1LP3-201ENST00000523033 208 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 OR56A7P-201ENST00000524865 941 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 AP005431.1-201ENST00000618479 319 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 MAPK10-270ENST00000641102 3538 ntBASIC6.55□□□□□ -1.36
NXF3Q9H4D5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NXF3Q9H4D5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 CCNT2P1-201ENST00000423082 1315 ntBASIC6.54□□□□□ -1.36
NXF3Q9H4D5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 DOCK11P1-201ENST00000553480 5932 ntBASIC6.54□□□□□ -1.36
NXF3Q9H4D5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 RNA5SP284-201ENST00000384547 118 ntBASIC6.54□□□□□ -1.36
NXF3Q9H4D5 MTND6P12-201ENST00000428247 522 ntBASIC6.54□□□□□ -1.36
NXF3Q9H4D5 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.54□□□□□ -1.36
NXF3Q9H4D5 AC104109.1-201ENST00000498563 436 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 523.5 ms