Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 FAM32BP-201ENST00000344033 333 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 RNA5SP188-201ENST00000362916 129 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 RNU6-249P-201ENST00000363016 102 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 RNA5SP140-201ENST00000364524 92 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC240504.1-201ENST00000395709 845 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AL359694.1-201ENST00000403247 604 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 RN7SKP146-201ENST00000410242 334 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 UBTFL2-201ENST00000411859 1191 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 RPS7P12-201ENST00000422385 582 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX3Q99909 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC092601.1-201ENST00000444526 383 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 OR6C72P-201ENST00000451403 892 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 RNU6-775P-201ENST00000459318 96 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC147055.1-201ENST00000509261 750 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AL390198.2-201ENST00000510553 222 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC011352.2-201ENST00000514574 1016 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC138517.1-201ENST00000515724 568 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AP002981.1-201ENST00000517692 975 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 AL445383.1-201ENST00000554689 874 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 EIF1AXP2-201ENST00000555940 413 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC011270.1-201ENST00000558606 583 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC138207.8-204ENST00000579588 527 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 RN7SL270P-201ENST00000579643 281 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 WBP1LP11-201ENST00000586141 328 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX3Q99909 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC091768.1-201ENST00000609258 930 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC015819.1-201ENST00000613588 663 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX3Q99909 AC061999.1-201ENST00000624454 177 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AL035425.4-201ENST00000624509 1063 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX3Q99909 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX3Q99909 AC007342.9-201ENST00000623877 1385 ntBASIC5.41□□□□□ -1.54
SSX3Q99909 AC003985.2-201ENST00000562268 1669 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC217777.1-201ENST00000570034 1471 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AL731532.1-201ENST00000623972 4236 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 SNORA38B-201ENST00000363524 131 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 SNORD8-201ENST00000363915 110 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-1320P-201ENST00000390838 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-1269P-201ENST00000391139 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AL590635.1-201ENST00000406314 586 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 SNORA79B-201ENST00000410557 148 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RN7SKP38-201ENST00000410782 309 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU2-18P-201ENST00000411224 162 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX3Q99909 FAM183DP-201ENST00000421987 399 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 VTI1BP4-201ENST00000427516 527 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 BX679664.2-201ENST00000439282 283 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC245291.3-201ENST00000443400 292 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RPL26P30-201ENST00000453533 435 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC099670.1-201ENST00000455141 783 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RBMY2HP-201ENST00000457961 720 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-599P-201ENST00000459383 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 RNU6-1193P-201ENST00000459461 107 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC099340.1-201ENST00000475247 599 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC090058.1-201ENST00000498788 435 ntBASIC5.4□□□□□ -1.54
SSX3Q99909 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX3Q99909 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX3Q99909 AP000859.1-201ENST00000525536 307 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms