Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.53□□□□□ -1.04
RXRBP28702 MIR193BHG-214ENST00000641765 509 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC104964.2-201ENST00000562242 4641 ntBASIC8.53□□□□□ -1.04
RXRBP28702 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
RXRBP28702 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 RACGAP1P-201ENST00000550663 1879 ntBASIC8.53□□□□□ -1.04
RXRBP28702 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
RXRBP28702 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
RXRBP28702 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.53□□□□□ -1.04
RXRBP28702 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.04
RXRBP28702 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.52□□□□□ -1.04
RXRBP28702 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 AC090983.1-201ENST00000623426 3897 ntBASIC8.52□□□□□ -1.05
RXRBP28702 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RXRBP28702 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RXRBP28702 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RXRBP28702 SNORA21-201ENST00000362423 132 ntBASIC8.52□□□□□ -1.05
RXRBP28702 RBMY2KP-201ENST00000418221 992 ntBASIC8.52□□□□□ -1.05
RXRBP28702 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.52□□□□□ -1.05
RXRBP28702 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 NDUFA5P10-201ENST00000432147 357 ntBASIC8.52□□□□□ -1.05
RXRBP28702 AC010153.1-201ENST00000432862 727 ntBASIC8.52□□□□□ -1.05
RXRBP28702 SPRYD7P1-201ENST00000443861 570 ntBASIC8.52□□□□□ -1.05
RXRBP28702 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 RN7SL369P-201ENST00000477138 299 ntBASIC8.52□□□□□ -1.05
RXRBP28702 RPL34P33-201ENST00000486062 334 ntBASIC8.52□□□□□ -1.05
RXRBP28702 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC8.52□□□□□ -1.05
RXRBP28702 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.52□□□□□ -1.05
RXRBP28702 BX510359.5-201ENST00000515651 304 ntBASIC8.52□□□□□ -1.05
RXRBP28702 Y_RNA.655-201ENST00000515919 96 ntBASIC8.52□□□□□ -1.05
RXRBP28702 EEF1B2P2-201ENST00000519625 676 ntBASIC8.52□□□□□ -1.05
RXRBP28702 OR8G5-201ENST00000524943 1041 ntBASIC8.52□□□□□ -1.05
RXRBP28702 AC113192.3-201ENST00000529152 742 ntBASIC8.52□□□□□ -1.05
RXRBP28702 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC8.52□□□□□ -1.05
RXRBP28702 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC8.52□□□□□ -1.05
RXRBP28702 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 AP001823.1-201ENST00000604056 1003 ntBASIC8.52□□□□□ -1.05
RXRBP28702 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 MTCO1P1-201ENST00000624263 1081 ntBASIC8.52□□□□□ -1.05
RXRBP28702 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RXRBP28702 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
RXRBP28702 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.52□□□□□ -1.05
RXRBP28702 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RXRBP28702 AL355377.1-201ENST00000621125 1653 ntBASIC8.52□□□□□ -1.05
RXRBP28702 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.52□□□□□ -1.05
RXRBP28702 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.52□□□□□ -1.05
RXRBP28702 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 NEPNP-201ENST00000404786 1371 ntBASIC8.51□□□□□ -1.05
RXRBP28702 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
RXRBP28702 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 Y_RNA.505-201ENST00000384489 102 ntBASIC8.51□□□□□ -1.05
RXRBP28702 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 RPL34P3-201ENST00000421454 338 ntBASIC8.51□□□□□ -1.05
RXRBP28702 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 MTCO3P5-201ENST00000433620 714 ntBASIC8.51□□□□□ -1.05
RXRBP28702 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AL772161.1-201ENST00000439130 476 ntBASIC8.51□□□□□ -1.05
RXRBP28702 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.51□□□□□ -1.05
RXRBP28702 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC002553.3-201ENST00000453002 341 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AC104164.3-201ENST00000467363 1258 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC020898.1-201ENST00000474167 787 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC093267.1-201ENST00000489176 961 ntBASIC8.51□□□□□ -1.05
RXRBP28702 OR51K1P-201ENST00000510214 950 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC121161.1-201ENST00000510606 652 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AL671862.1-201ENST00000515851 349 ntBASIC8.51□□□□□ -1.05
RXRBP28702 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.51□□□□□ -1.05
RXRBP28702 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AC105233.3-201ENST00000531125 744 ntBASIC8.51□□□□□ -1.05
RXRBP28702 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 AC233699.1-201ENST00000569955 1168 ntBASIC8.51□□□□□ -1.05
RXRBP28702 CYP4A44P-201ENST00000569984 154 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms