Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.82□□□□□ -1.64
SSSCA1O60232 MIR3187-201ENST00000583431 70 ntBASIC4.82□□□□□ -1.64
SSSCA1O60232 AC119403.2-201ENST00000590960 598 ntBASIC4.82□□□□□ -1.64
SSSCA1O60232 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.82□□□□□ -1.64
SSSCA1O60232 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.82□□□□□ -1.64
SSSCA1O60232 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
SSSCA1O60232 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSSCA1O60232 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SSSCA1O60232 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSSCA1O60232 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.82□□□□□ -1.64
SSSCA1O60232 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSSCA1O60232 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
SSSCA1O60232 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSSCA1O60232 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSSCA1O60232 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSSCA1O60232 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 RNU1-5P-201ENST00000362684 144 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RNU105B-201ENST00000364478 208 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RNA5SP302-201ENST00000364896 100 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 SNORA70.6-201ENST00000383934 134 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 DHFRP2-201ENST00000414224 547 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RPL21P50-201ENST00000417698 477 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 PPIAP23-201ENST00000420099 497 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RPS15AP30-201ENST00000420976 390 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 GTF3AP6-201ENST00000432585 986 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 AL645939.3-201ENST00000435408 225 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSSCA1O60232 OR3D1P-201ENST00000438288 955 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.81□□□□□ -1.64
SSSCA1O60232 RBMY2EP-202ENST00000456360 940 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 RARRES2P3-201ENST00000457739 473 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RN7SL197P-201ENST00000466981 299 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 RPL12P31-201ENST00000478433 450 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC008868.1-201ENST00000509786 737 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 OR56A7P-201ENST00000524865 941 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AP000619.2-201ENST00000546014 969 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.81□□□□□ -1.64
SSSCA1O60232 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.81□□□□□ -1.64
SSSCA1O60232 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 NDUFB9P1-201ENST00000604683 510 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 AC015712.7-201ENST00000615211 635 ntBASIC4.81□□□□□ -1.64
SSSCA1O60232 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.81□□□□□ -1.64
SSSCA1O60232 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SSSCA1O60232 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.81□□□□□ -1.64
SSSCA1O60232 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSSCA1O60232 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL360270.2-201ENST00000562952 5985 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC010894.1-201ENST00000313760 361 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 NPM1P37-201ENST00000403105 874 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 NMD3P2-201ENST00000421815 761 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 NPM1P18-201ENST00000434232 732 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL592114.2-201ENST00000440142 532 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL845321.1-201ENST00000444603 348 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 HIGD1AP16-201ENST00000450986 258 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms