Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC084824.2-201ENST00000548906 345 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC009962.1-201ENST00000567327 3813 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AL008723.3-201ENST00000608926 449 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AC007671.1-201ENST00000616957 830 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AP001284.1-201ENST00000528393 2118 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 AL161756.3-201ENST00000641216 2071 ntBASIC5.51□□□□□ -1.53
HMG20AQ9NP66 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.51□□□□□ -1.53
HMG20AQ9NP66 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RN7SKP185-201ENST00000362813 326 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RPL5P20-201ENST00000403848 896 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RNA5SP431-201ENST00000410312 120 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AL672212.1-201ENST00000422246 400 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AL596268.1-201ENST00000427910 1048 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC022080.2-201ENST00000452932 533 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RN7SKP198-201ENST00000459286 306 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC012123.2-201ENST00000485809 248 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RPL19P11-201ENST00000495944 589 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 NPM1P21-201ENST00000513394 762 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 OR6M2P-201ENST00000529831 871 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 RPA2P3-201ENST00000533268 770 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC100832.2-201ENST00000582080 776 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 NPIPB1P-202ENST00000588786 828 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AL512430.4-201ENST00000603085 613 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC027506.1-201ENST00000621395 198 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC005514.1-201ENST00000623521 208 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AL603750.1-201ENST00000624216 1717 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC010132.4-201ENST00000569883 1368 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 AC005224.3-201ENST00000584683 2140 ntBASIC5.5□□□□□ -1.53
HMG20AQ9NP66 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMG20AQ9NP66 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 HSPA8P14-201ENST00000552265 1805 ntBASIC5.49□□□□□ -1.53
HMG20AQ9NP66 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.49□□□□□ -1.53
HMG20AQ9NP66 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms