Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 OR4K17-201ENST00000315543 1032 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 RN7SKP250-201ENST00000363924 321 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 RNU1-84P-201ENST00000365447 164 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 RNU1-46P-201ENST00000384425 164 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MIR640-201ENST00000385086 96 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 PRELID1P1-201ENST00000403549 660 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL139184.1-202ENST00000422303 222 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MRPL50P1-201ENST00000431951 384 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 UBE2V2P1-201ENST00000434717 398 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 SETD6P1-201ENST00000444575 317 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 VN1R96P-201ENST00000446052 858 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL139156.3-201ENST00000454802 394 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC108729.2-201ENST00000476543 840 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AP003033.2-201ENST00000528901 805 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC134349.2-201ENST00000535136 910 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 YWHAZP1-201ENST00000556286 722 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC027216.1-201ENST00000577726 685 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC015911.5-201ENST00000587076 451 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC119751.7-201ENST00000600494 245 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 BUB1P1-201ENST00000603541 607 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC011891.2-201ENST00000604949 397 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC090246.1-201ENST00000616499 426 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AC009090.3-201ENST00000616553 565 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AP002791.1-201ENST00000623291 381 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 AL359195.2-201ENST00000623657 4412 ntBASIC6.84□□□□□ -1.31
CDK5RAP1Q96SZ6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDK5RAP1Q96SZ6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL139384.2-201ENST00000613809 3590 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MAPK10-383ENST00000642032 3390 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 RPL5P20-201ENST00000403848 896 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MORF4L1P6-201ENST00000418771 268 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 NPM1P25-201ENST00000429734 854 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 DUXAP8-207ENST00000456786 622 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 RN7SL568P-201ENST00000493069 298 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC023818.1-201ENST00000498379 384 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC106800.2-201ENST00000514009 1103 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 OR7E158P-201ENST00000524483 910 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC110056.1-201ENST00000525759 911 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AP001000.1-201ENST00000526843 742 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 OR4A13P-201ENST00000529316 942 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms