Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RPL9P15-201ENST00000491096 532 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC083906.1-201ENST00000509298 406 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 MINOS1P4-201ENST00000515470 318 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC096661.1-201ENST00000515870 822 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 IGLC4-201ENST00000517690 248 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 IGHV3-57-201ENST00000520143 280 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 GLYATL1P4-201ENST00000529326 906 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 SNX6P1-201ENST00000601728 1224 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC005479.3-201ENST00000602790 431 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC022387.2-201ENST00000604050 448 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 HMGB1P51-201ENST00000605166 638 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC005393.1-201ENST00000617916 584 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 Z97989.1-201ENST00000531702 2421 ntBASIC5.65□□□□□ -1.51
C11orf88Q6PI97 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C11orf88Q6PI97 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 NXF4-202ENST00000416098 1465 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC027575.3-201ENST00000583058 2747 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC097461.1-201ENST00000568928 2821 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 SNORD65-201ENST00000391079 73 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RPL5P19-201ENST00000404228 893 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL359715.1-201ENST00000404330 555 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RNA5SP115-201ENST00000411160 107 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC013470.3-201ENST00000420252 1194 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 GNG5P5-201ENST00000420444 220 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC022022.1-201ENST00000430304 178 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RPL3P11-201ENST00000434028 1146 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 MYL6P3-201ENST00000436904 432 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC234771.4-201ENST00000441416 730 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 WDR82P2-201ENST00000444540 928 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 CCRL1P1-201ENST00000449542 1053 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ST13P21-201ENST00000453250 1098 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 OR7E7P-201ENST00000455678 1012 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 HSPE1P22-201ENST00000456856 327 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 STRADBP1-201ENST00000478954 1281 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RPL23AP8-201ENST00000479812 475 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RPL7AP10-201ENST00000481016 791 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 LARP7P4-201ENST00000481075 878 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC009879.1-201ENST00000520029 839 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 HMGN1P26-201ENST00000558737 303 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC007494.1-201ENST00000562293 760 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ARGFXP2-201ENST00000579304 949 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC025171.4-201ENST00000607250 1047 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC007620.3-201ENST00000608131 497 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms