Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPL7AP14-201ENST00000424041 802 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AL590399.4-201ENST00000436561 601 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFRAP16234 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFRAP16234 CTSLP6-201ENST00000458273 1002 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AC090589.1-201ENST00000473109 362 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC091874.2-201ENST00000505889 720 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFRAP16234 OR6M2P-201ENST00000529831 871 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC036111.2-201ENST00000533247 901 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC084121.1-201ENST00000533882 835 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFRAP16234 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFRAP16234 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 AL137067.2-201ENST00000621202 131 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC073593.1-201ENST00000624500 411 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AL357140.4-201ENST00000636827 412 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFRAP16234 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDGFRAP16234 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PDGFRAP16234 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFRAP16234 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFRAP16234 EIF3EP1-201ENST00000433978 1316 ntBASIC6.48□□□□□ -1.37
PDGFRAP16234 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFRAP16234 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC024651.2-201ENST00000562480 2098 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFRAP16234 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 CXADRP1-201ENST00000398098 1095 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 OOSP1-201ENST00000398992 1270 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 GCNT1P4-201ENST00000404096 329 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 SNORA11.5-201ENST00000408163 128 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 RN7SKP151-201ENST00000410230 316 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFRAP16234 GAPDHP75-201ENST00000433910 943 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFRAP16234 RPL7L1P3-201ENST00000455249 689 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 AC112187.1-201ENST00000455837 479 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 RN7SL254P-201ENST00000460609 284 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 RPL12P30-201ENST00000488389 499 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 AC108103.1-201ENST00000511286 446 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 MAST4-IT1-201ENST00000514241 658 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 HSD3BP3-201ENST00000514706 994 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC115989.2-201ENST00000578640 563 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 MIR4433B-201ENST00000581329 102 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 MIR4271-201ENST00000582451 67 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFRAP16234 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 CXADRP3-202ENST00000617265 1100 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFRAP16234 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFRAP16234 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFRAP16234 AC024587.1-201ENST00000505925 2157 ntBASIC6.47□□□□□ -1.37
PDGFRAP16234 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFRAP16234 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PDGFRAP16234 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.46□□□□□ -1.37
PDGFRAP16234 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFRAP16234 AC018717.1-201ENST00000457712 1505 ntBASIC6.46□□□□□ -1.37
PDGFRAP16234 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.46□□□□□ -1.37
PDGFRAP16234 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
PDGFRAP16234 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.46□□□□□ -1.38
PDGFRAP16234 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms