Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC115283.1-201ENST00000427353 400 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 PARP4P1-201ENST00000435945 2337 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC068228.1-201ENST00000461723 211 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 NDUFA5P5-201ENST00000468361 342 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 NPM1P27-201ENST00000502784 830 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 MIR4420-201ENST00000583944 77 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC008507.3-201ENST00000585753 472 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC108865.2-201ENST00000606881 432 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AL365181.4-201ENST00000609800 547 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC024884.1-201ENST00000620583 399 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 Z95114.1-201ENST00000624264 14574 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC110373.1-201ENST00000505994 3505 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC137056.2-201ENST00000624055 1958 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC093225.1-201ENST00000506867 1408 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC005225.5-201ENST00000623547 2225 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SNORA21-201ENST00000362423 132 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC245884.2-201ENST00000426257 404 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC002075.1-201ENST00000457396 676 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 PRMT5P1-201ENST00000514351 598 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 RN7SKP67-201ENST00000515905 235 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 RNA5SP434-201ENST00000516647 121 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 CYCSP38-201ENST00000559840 322 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC022400.9-201ENST00000623633 273 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC018717.1-201ENST00000457712 1505 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AL354854.1-201ENST00000455940 1363 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 AL162456.1-201ENST00000634535 2006 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 TNPO1P2-201ENST00000426249 2665 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 BX284613.1-201ENST00000452221 1641 ntBASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.77□□□□□ -1.49
H3F3CQ6NXT2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AL731556.1-201ENST00000394628 3711 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 FAM32BP-201ENST00000344033 333 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 RNA5SP478-201ENST00000364657 115 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 SEPT7P2-202ENST00000398921 823 ntBASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3CQ6NXT2 OR3D1P-201ENST00000438288 955 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms