Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
GABPAQ06546 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
GABPAQ06546 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.14□□□□□ -1.27
GABPAQ06546 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.14□□□□□ -1.27
GABPAQ06546 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.14□□□□□ -1.27
GABPAQ06546 AL035660.1-201ENST00000422041 222 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
GABPAQ06546 SETP20-201ENST00000457046 852 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 AC023245.1-201ENST00000468501 517 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 RN7SL165P-201ENST00000477476 291 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.14□□□□□ -1.27
GABPAQ06546 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.14□□□□□ -1.27
GABPAQ06546 AC110056.1-201ENST00000525759 911 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 OR4A40P-201ENST00000533878 948 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.14□□□□□ -1.27
GABPAQ06546 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.14□□□□□ -1.27
GABPAQ06546 AL591848.4-201ENST00000567832 3472 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 MIR4776-2-201ENST00000580204 80 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 AC012254.3-201ENST00000591183 2117 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.14□□□□□ -1.27
GABPAQ06546 AC091193.1-201ENST00000604640 448 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 RPL12P48-201ENST00000605620 304 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.14□□□□□ -1.27
GABPAQ06546 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
GABPAQ06546 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
GABPAQ06546 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.13□□□□□ -1.27
GABPAQ06546 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.13□□□□□ -1.27
GABPAQ06546 PABPC1P8-201ENST00000452851 2086 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 AC027088.4-201ENST00000611559 1947 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 KARSP1-201ENST00000451871 1752 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.13□□□□□ -1.27
GABPAQ06546 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
GABPAQ06546 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.13□□□□□ -1.27
GABPAQ06546 RN7SKP77-201ENST00000363261 353 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 RNA5SP500-201ENST00000364486 119 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 RNA5SP284-201ENST00000384547 118 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 PTCD2P2-201ENST00000415579 1095 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 AL512637.1-201ENST00000439523 1231 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 BMS1P10-201ENST00000443754 1120 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.13□□□□□ -1.27
GABPAQ06546 RPL23AP60-201ENST00000450011 454 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 AC096754.1-201ENST00000508904 818 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 SETP21-201ENST00000514799 892 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.13□□□□□ -1.27
GABPAQ06546 AL356801.1-201ENST00000559320 294 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.13□□□□□ -1.27
GABPAQ06546 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.13□□□□□ -1.27
GABPAQ06546 RN7SL753P-201ENST00000581238 290 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 AP005431.1-201ENST00000618479 319 ntBASIC7.13□□□□□ -1.27
GABPAQ06546 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.13□□□□□ -1.27
GABPAQ06546 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
GABPAQ06546 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.13□□□□□ -1.27
GABPAQ06546 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
GABPAQ06546 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
GABPAQ06546 TMEM75-201ENST00000624314 2165 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
GABPAQ06546 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
GABPAQ06546 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 RNA5SP510-201ENST00000364697 99 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AL512422.1-201ENST00000407033 553 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.12□□□□□ -1.27
GABPAQ06546 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.12□□□□□ -1.27
GABPAQ06546 ACA64.1-201ENST00000459171 127 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.12□□□□□ -1.27
GABPAQ06546 RN7SL273P-201ENST00000481561 299 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 PPIAP19-201ENST00000486414 492 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 RN7SL101P-201ENST00000496350 279 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.12□□□□□ -1.27
GABPAQ06546 MTATP6P1-201ENST00000514057 681 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
GABPAQ06546 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.12□□□□□ -1.27
GABPAQ06546 OR4H6P-201ENST00000563771 921 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AC092121.1-201ENST00000569452 202 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AC233699.1-201ENST00000569955 1168 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AC012146.2-201ENST00000576545 416 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 MIR6729-201ENST00000618194 65 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.12□□□□□ -1.27
GABPAQ06546 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
GABPAQ06546 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.12□□□□□ -1.27
GABPAQ06546 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
GABPAQ06546 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms