Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 RNU6-362P-201ENST00000516736 90 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 EIF1AXP2-201ENST00000555940 413 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 AC012368.3-201ENST00000604190 219 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 AP003400.2-201ENST00000624036 666 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 AC022726.2-201ENST00000634673 547 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC007603.3-201ENST00000636915 979 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 AL442128.2-201ENST00000620246 1824 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 AP001284.1-201ENST00000528393 2118 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.59□□□□□ -1.35
HDAC4P56524 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HDAC4P56524 RNA5SP485-201ENST00000365053 119 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 SNORA70H-201ENST00000383910 135 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 SNORA70J-201ENST00000384182 135 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 MIR191-201ENST00000384873 92 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.59□□□□□ -1.35
HDAC4P56524 RN7SKP161-201ENST00000411110 305 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.59□□□□□ -1.35
HDAC4P56524 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.59□□□□□ -1.35
HDAC4P56524 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 AL358876.1-201ENST00000453364 1075 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 RPS7P10-201ENST00000464254 603 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 RN7SL369P-201ENST00000477138 299 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 RN7SL165P-201ENST00000477476 291 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.59□□□□□ -1.35
HDAC4P56524 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 AC024589.2-201ENST00000605642 1294 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 AC107905.1-201ENST00000616204 426 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 AC243960.7-201ENST00000623532 707 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.59□□□□□ -1.35
HDAC4P56524 OR7E91P-202ENST00000642062 1198 ntBASIC6.59□□□□□ -1.35
HDAC4P56524 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.59□□□□□ -1.35
HDAC4P56524 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.59□□□□□ -1.35
HDAC4P56524 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HDAC4P56524 AC120036.2-201ENST00000509729 1474 ntBASIC6.59□□□□□ -1.36
HDAC4P56524 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
HDAC4P56524 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HDAC4P56524 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HDAC4P56524 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HDAC4P56524 AC119674.1-213ENST00000641177 1386 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC4P56524 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC4P56524 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HDAC4P56524 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC4P56524 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
HDAC4P56524 AL157702.1-201ENST00000398764 426 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 RN7SKP38-201ENST00000410782 309 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.58□□□□□ -1.36
HDAC4P56524 AC244453.4-201ENST00000419150 388 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC4P56524 AC013268.2-201ENST00000420753 337 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 RPS7P14-201ENST00000426405 583 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC4P56524 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC4P56524 EMC3-AS1-205ENST00000438698 534 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.58□□□□□ -1.36
HDAC4P56524 DNAJC19P5-201ENST00000443295 316 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC4P56524 AP002371.1-201ENST00000463604 433 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC4P56524 RPL12P31-201ENST00000478433 450 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 AL133372.1-201ENST00000493565 745 ntBASIC6.58□□□□□ -1.36
HDAC4P56524 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 773.1 ms