Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC135999.1-201ENST00000478962 479 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AL035690.1-201ENST00000490892 383 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC015524.1-201ENST00000491585 472 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC093325.1-201ENST00000508378 326 ntBASIC6.04□□□□□ -1.44
CDH13P55290 IGKV2-19-201ENST00000518132 283 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC131935.1-201ENST00000524621 333 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 HNRNPCP1-201ENST00000556181 766 ntBASIC6.04□□□□□ -1.44
CDH13P55290 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH13P55290 AC011270.1-201ENST00000558606 583 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AL591222.2-201ENST00000604443 754 ntBASIC6.04□□□□□ -1.44
CDH13P55290 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC009237.12-201ENST00000604755 742 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC022106.1-201ENST00000612834 766 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AC091059.2-201ENST00000623355 614 ntBASIC6.04□□□□□ -1.44
CDH13P55290 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 CLUHP10-201ENST00000631979 980 ntBASIC6.04□□□□□ -1.44
CDH13P55290 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 AC024587.1-201ENST00000505925 2157 ntBASIC6.04□□□□□ -1.44
CDH13P55290 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH13P55290 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH13P55290 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDH13P55290 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 AL078595.2-201ENST00000605309 1780 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC120036.2-201ENST00000509729 1474 ntBASIC6.03□□□□□ -1.44
CDH13P55290 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 AL929601.4-201ENST00000613011 1341 ntBASIC6.03□□□□□ -1.44
CDH13P55290 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDH13P55290 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 RN7SKP121-201ENST00000410842 305 ntBASIC6.03□□□□□ -1.44
CDH13P55290 RPL21P50-201ENST00000417698 477 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH13P55290 OR6R1P-201ENST00000431838 940 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC097523.2-201ENST00000435551 652 ntBASIC6.03□□□□□ -1.44
CDH13P55290 GAPDHP23-201ENST00000444823 993 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH13P55290 AL034369.1-201ENST00000453808 477 ntBASIC6.03□□□□□ -1.44
CDH13P55290 RN7SL326P-201ENST00000477493 296 ntBASIC6.03□□□□□ -1.44
CDH13P55290 PPP1R11P1-201ENST00000486095 376 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH13P55290 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 AC139713.1-202ENST00000512366 460 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH13P55290 RNA5SP206-201ENST00000516703 121 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 AC010547.7-201ENST00000570323 333 ntBASIC6.03□□□□□ -1.44
CDH13P55290 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH13P55290 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH13P55290 AC004890.3-201ENST00000605566 1095 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AL591167.1-201ENST00000607321 456 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 AC010998.3-201ENST00000613871 631 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AL137067.2-201ENST00000621202 131 ntBASIC6.03□□□□□ -1.44
CDH13P55290 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH13P55290 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH13P55290 AL359955.1-201ENST00000455242 3275 ntBASIC6.03□□□□□ -1.44
CDH13P55290 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH13P55290 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
CDH13P55290 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 AL513548.1-201ENST00000562904 1724 ntBASIC6.02□□□□□ -1.45
CDH13P55290 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
CDH13P55290 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDH13P55290 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH13P55290 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CDH13P55290 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH13P55290 RNU1-49P-201ENST00000363468 159 ntBASIC6.02□□□□□ -1.45
CDH13P55290 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH13P55290 AL157702.1-201ENST00000398764 426 ntBASIC6.02□□□□□ -1.45
CDH13P55290 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms