Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 HMGB1P26-201ENST00000452520 628 ntBASIC7.95□□□□□ -1.14
LIG1P18858 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 AC020779.1-201ENST00000478757 796 ntBASIC7.95□□□□□ -1.14
LIG1P18858 RPS10P28-201ENST00000480396 498 ntBASIC7.95□□□□□ -1.14
LIG1P18858 OR9N1P-202ENST00000494289 481 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC134050.1-201ENST00000495088 933 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC073648.3-201ENST00000504939 925 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AF213884.2-201ENST00000510417 903 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.95□□□□□ -1.14
LIG1P18858 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.95□□□□□ -1.14
LIG1P18858 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 AP001646.2-201ENST00000528645 1156 ntBASIC7.95□□□□□ -1.14
LIG1P18858 GCSHP4-201ENST00000538792 439 ntBASIC7.95□□□□□ -1.14
LIG1P18858 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.95□□□□□ -1.14
LIG1P18858 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.95□□□□□ -1.14
LIG1P18858 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.95□□□□□ -1.14
LIG1P18858 AC096708.2-201ENST00000577676 512 ntBASIC7.95□□□□□ -1.14
LIG1P18858 MIR3159-201ENST00000584572 74 ntBASIC7.95□□□□□ -1.14
LIG1P18858 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 AC093673.2-201ENST00000609674 331 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC027271.1-201ENST00000610270 610 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AL031777.2-201ENST00000611953 196 ntBASIC7.95□□□□□ -1.14
LIG1P18858 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 AC093909.6-201ENST00000624757 775 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC017037.3-201ENST00000625016 472 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC092608.3-201ENST00000625017 386 ntBASIC7.95□□□□□ -1.14
LIG1P18858 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 AC006927.3-201ENST00000638789 384 ntBASIC7.95□□□□□ -1.14
LIG1P18858 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LIG1P18858 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 MTND4P26-201ENST00000415971 1359 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.94□□□□□ -1.14
LIG1P18858 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 AL353763.1-201ENST00000624467 1628 ntBASIC7.94□□□□□ -1.14
LIG1P18858 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
LIG1P18858 RNA5SP429-201ENST00000363688 109 ntBASIC7.94□□□□□ -1.14
LIG1P18858 RNA5SP442-201ENST00000365050 107 ntBASIC7.94□□□□□ -1.14
LIG1P18858 RPS3AP5-201ENST00000389400 821 ntBASIC7.94□□□□□ -1.14
LIG1P18858 FAUP2-201ENST00000394301 401 ntBASIC7.94□□□□□ -1.14
LIG1P18858 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 UBE2V1P11-201ENST00000411559 285 ntBASIC7.94□□□□□ -1.14
LIG1P18858 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 TRGV6-201ENST00000417928 299 ntBASIC7.94□□□□□ -1.14
LIG1P18858 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.94□□□□□ -1.14
LIG1P18858 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.94□□□□□ -1.14
LIG1P18858 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 AC073900.1-201ENST00000429766 776 ntBASIC7.94□□□□□ -1.14
LIG1P18858 UBE2D3P1-201ENST00000436669 444 ntBASIC7.94□□□□□ -1.14
LIG1P18858 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 AL158214.1-201ENST00000444423 404 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 RPL36AP55-201ENST00000454114 305 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 RN7SL392P-201ENST00000473024 299 ntBASIC7.94□□□□□ -1.14
LIG1P18858 RN7SL306P-201ENST00000492941 296 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC105391.1-201ENST00000503155 1045 ntBASIC7.94□□□□□ -1.14
LIG1P18858 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.94□□□□□ -1.14
LIG1P18858 RNA5SP75-201ENST00000516841 111 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 AP000662.1-201ENST00000530952 487 ntBASIC7.94□□□□□ -1.14
LIG1P18858 OR7E161P-201ENST00000533722 967 ntBASIC7.94□□□□□ -1.14
LIG1P18858 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.94□□□□□ -1.14
LIG1P18858 MIR5095-201ENST00000578844 88 ntBASIC7.94□□□□□ -1.14
LIG1P18858 RN7SL42P-201ENST00000579786 294 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC090241.1-201ENST00000587732 621 ntBASIC7.94□□□□□ -1.14
LIG1P18858 SNX6P1-201ENST00000601728 1224 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC104985.3-201ENST00000623479 597 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC083865.1-201ENST00000636634 831 ntBASIC7.94□□□□□ -1.14
LIG1P18858 AC006927.2-201ENST00000639256 389 ntBASIC7.94□□□□□ -1.14
LIG1P18858 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.94□□□□□ -1.14
LIG1P18858 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LIG1P18858 AP002800.1-201ENST00000624982 2225 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms