Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.08□□□□□ -1.44
SHOX2O60902 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 AL158214.1-201ENST00000444423 404 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.08□□□□□ -1.44
SHOX2O60902 UBBP5-201ENST00000446970 266 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 CBX1P2-201ENST00000453841 458 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.08□□□□□ -1.44
SHOX2O60902 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 AC010442.1-201ENST00000515583 816 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 RN7SKP288-201ENST00000516227 268 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.08□□□□□ -1.44
SHOX2O60902 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.08□□□□□ -1.44
SHOX2O60902 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 MIR378C-201ENST00000578683 81 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.08□□□□□ -1.44
SHOX2O60902 SNORD96A-201ENST00000606577 79 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.08□□□□□ -1.44
SHOX2O60902 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SHOX2O60902 RPL31P11-201ENST00000426558 1558 ntBASIC6.08□□□□□ -1.44
SHOX2O60902 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHOX2O60902 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHOX2O60902 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.08□□□□□ -1.44
SHOX2O60902 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SHOX2O60902 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.07□□□□□ -1.44
SHOX2O60902 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 QRSL1P3-201ENST00000552666 1316 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHOX2O60902 AC245036.1-201ENST00000391727 309 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 RN7SKP117-201ENST00000410175 264 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.07□□□□□ -1.44
SHOX2O60902 HYALP1-201ENST00000417674 1279 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC091492.1-201ENST00000419844 272 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.07□□□□□ -1.44
SHOX2O60902 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 SLAMF6P1-201ENST00000451067 602 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 RN7SL492P-201ENST00000460700 295 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 RPS16P9-201ENST00000477220 427 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC079080.1-201ENST00000479841 822 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.07□□□□□ -1.44
SHOX2O60902 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 TPRX1P1-201ENST00000557620 319 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC007346.2-201ENST00000564816 892 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.07□□□□□ -1.44
SHOX2O60902 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.07□□□□□ -1.44
SHOX2O60902 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.07□□□□□ -1.44
SHOX2O60902 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 MIR6085-201ENST00000618314 110 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 MIR665-201ENST00000635949 72 ntBASIC6.07□□□□□ -1.44
SHOX2O60902 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.07□□□□□ -1.44
SHOX2O60902 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHOX2O60902 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHOX2O60902 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHOX2O60902 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHOX2O60902 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHOX2O60902 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.06□□□□□ -1.44
SHOX2O60902 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.06□□□□□ -1.44
SHOX2O60902 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHOX2O60902 AL603750.1-201ENST00000624216 1717 ntBASIC6.06□□□□□ -1.44
SHOX2O60902 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHOX2O60902 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHOX2O60902 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHOX2O60902 RN7SKP189-201ENST00000365042 330 ntBASIC6.06□□□□□ -1.44
SHOX2O60902 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SHOX2O60902 MRPS6P2-201ENST00000381143 370 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms