Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh5Q9QUM7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh5Q9QUM7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Gm13263-201ENSMUST00000121271 838 ntBASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh5Q9QUM7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh5Q9QUM7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh5Q9QUM7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh5Q9QUM7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh5Q9QUM7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Msh5Q9QUM7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Gm45696-201ENSMUST00000212088 985 ntBASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh5Q9QUM7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
Msh5Q9QUM7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh5Q9QUM7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh5Q9QUM7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms