Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Calr3Q9D9Q6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Calr3Q9D9Q6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Calr3Q9D9Q6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Calr3Q9D9Q6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Calr3Q9D9Q6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Reep4-203ENSMUST00000226563 1444 ntBASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Calr3Q9D9Q6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Calr3Q9D9Q6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.5■□□□□ 0.39
Calr3Q9D9Q6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Calr3Q9D9Q6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms