Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Mbd3l1Q9D9H3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mbd3l1Q9D9H3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mbd3l1Q9D9H3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms