Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Gm37292-201ENSMUST00000192062 758 ntBASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc43Q9CR29 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Gm43183-201ENSMUST00000200632 547 ntBASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc43Q9CR29 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc43Q9CR29 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc43Q9CR29 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc43Q9CR29 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc43Q9CR29 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms