Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn4Q99P72 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4Q99P72 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.61■■□□□ 1.05
Rtn4Q99P72 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Gm21362-201ENSMUST00000194272 928 ntBASIC21.61■■□□□ 1.05
Rtn4Q99P72 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn4Q99P72 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.61■■□□□ 1.05
Rtn4Q99P72 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.61■■□□□ 1.05
Rtn4Q99P72 AC238940.1-201ENSMUST00000225106 1858 ntBASIC21.6■■□□□ 1.05
Rtn4Q99P72 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Gm45058-201ENSMUST00000205810 766 ntBASIC21.6■■□□□ 1.05
Rtn4Q99P72 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.6■■□□□ 1.05
Rtn4Q99P72 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4Q99P72 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Gm10819-201ENSMUST00000099988 561 ntBASIC21.59■■□□□ 1.05
Rtn4Q99P72 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rtn4Q99P72 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Gm7638-201ENSMUST00000121348 967 ntBASIC21.58■■□□□ 1.05
Rtn4Q99P72 Gm23634-201ENSMUST00000175071 91 ntBASIC21.58■■□□□ 1.05
Rtn4Q99P72 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4Q99P72 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn4Q99P72 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.57■■□□□ 1.04
Rtn4Q99P72 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4Q99P72 Gm10418-201ENSMUST00000100943 576 ntBASIC21.57■■□□□ 1.04
Rtn4Q99P72 Gm10013-201ENSMUST00000106074 672 ntBASIC21.57■■□□□ 1.04
Rtn4Q99P72 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms