Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx6-1Q99MA9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx6-1Q99MA9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx6-1Q99MA9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Gm11594-201ENSMUST00000122313 162 ntBASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nkx6-1Q99MA9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm1401-201ENSMUST00000122048 772 ntBASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms