Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col20a1Q923P0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.07■□□□□ 0.8
Col20a1Q923P0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col20a1Q923P0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col20a1Q923P0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.07■□□□□ 0.8
Col20a1Q923P0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.06■□□□□ 0.8
Col20a1Q923P0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Phf7-203ENSMUST00000226565 1971 ntBASIC20.06■□□□□ 0.8
Col20a1Q923P0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
Col20a1Q923P0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col20a1Q923P0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Gm17807-201ENSMUST00000186869 298 ntBASIC20.05■□□□□ 0.8
Col20a1Q923P0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.05■□□□□ 0.8
Col20a1Q923P0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.05■□□□□ 0.8
Col20a1Q923P0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col20a1Q923P0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Col20a1Q923P0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Col20a1Q923P0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col20a1Q923P0 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.03■□□□□ 0.8
Col20a1Q923P0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Gm27357-201ENSMUST00000183754 135 ntBASIC20.02■□□□□ 0.8
Col20a1Q923P0 Gm27742-201ENSMUST00000184667 60 ntBASIC20.02■□□□□ 0.8
Col20a1Q923P0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.02■□□□□ 0.8
Col20a1Q923P0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col20a1Q923P0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms