Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga11Q91XY8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Gm10252-201ENSMUST00000209541 832 ntBASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga11Q91XY8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga11Q91XY8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga11Q91XY8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.39■□□□□ 0.22
Pcdhga11Q91XY8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhga11Q91XY8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhga11Q91XY8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Gm15378-201ENSMUST00000121894 207 ntBASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Gm43183-201ENSMUST00000200632 547 ntBASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhga11Q91XY8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms