Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf8Q8VC56 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Rnf8Q8VC56 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf8Q8VC56 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf8Q8VC56 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Mir2861-201ENSMUST00000175539 82 ntBASIC16.37■□□□□ 0.21
Rnf8Q8VC56 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf8Q8VC56 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Gm10418-201ENSMUST00000100943 576 ntBASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf8Q8VC56 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf8Q8VC56 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms