Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm13559-201ENSMUST00000120476 863 ntBASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Gm18958-201ENSMUST00000174258 762 ntBASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Mir6982-201ENSMUST00000184354 68 ntBASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Gm2274-201ENSMUST00000184539 609 ntBASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpap2Q8VC34 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.64■□□□□ 0.58
Rpap2Q8VC34 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpap2Q8VC34 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rpap2Q8VC34 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpap2Q8VC34 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpap2Q8VC34 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpap2Q8VC34 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rpap2Q8VC34 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Gm15565-201ENSMUST00000118890 427 ntBASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rpap2Q8VC34 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.61■□□□□ 0.57
Rpap2Q8VC34 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Gm43799-201ENSMUST00000201845 579 ntBASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Gm7370-201ENSMUST00000219471 767 ntBASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms