Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc9Q8VC31 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc9Q8VC31 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc9Q8VC31 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc9Q8VC31 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc9Q8VC31 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc9Q8VC31 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc9Q8VC31 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc9Q8VC31 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc9Q8VC31 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc9Q8VC31 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Gm15039-201ENSMUST00000118914 875 ntBASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc9Q8VC31 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Asic1-205ENSMUST00000228185 1818 ntBASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Gm27454-201ENSMUST00000185090 204 ntBASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc9Q8VC31 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Gm45760-201ENSMUST00000212190 1782 ntBASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms