Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nup58Q8R332 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nup58Q8R332 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nup58Q8R332 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Nup58Q8R332 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nup58Q8R332 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Gm6576-201ENSMUST00000169678 883 ntBASIC18.2■□□□□ 0.5
Nup58Q8R332 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.2■□□□□ 0.5
Nup58Q8R332 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.2■□□□□ 0.5
Nup58Q8R332 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nup58Q8R332 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nup58Q8R332 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nup58Q8R332 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nup58Q8R332 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Gm15375-201ENSMUST00000119510 849 ntBASIC18.19■□□□□ 0.5
Nup58Q8R332 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.19■□□□□ 0.5
Nup58Q8R332 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nup58Q8R332 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.19■□□□□ 0.5
Nup58Q8R332 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Nup58Q8R332 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.19■□□□□ 0.5
Nup58Q8R332 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup58Q8R332 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Mir6982-201ENSMUST00000184354 68 ntBASIC18.18■□□□□ 0.5
Nup58Q8R332 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup58Q8R332 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nup58Q8R332 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.17■□□□□ 0.5
Nup58Q8R332 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.17■□□□□ 0.5
Nup58Q8R332 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nup58Q8R332 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.17■□□□□ 0.5
Nup58Q8R332 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.17■□□□□ 0.5
Nup58Q8R332 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup58Q8R332 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup58Q8R332 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup58Q8R332 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup58Q8R332 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup58Q8R332 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup58Q8R332 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.16■□□□□ 0.5
Nup58Q8R332 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms