Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Paf1Q8K2T8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Paf1Q8K2T8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Gm43799-201ENSMUST00000201845 579 ntBASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.9■□□□□ 0.78
Paf1Q8K2T8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Paf1Q8K2T8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Paf1Q8K2T8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Paf1Q8K2T8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Paf1Q8K2T8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Paf1Q8K2T8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Paf1Q8K2T8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Paf1Q8K2T8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Gm2274-201ENSMUST00000184539 609 ntBASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Paf1Q8K2T8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms