Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim68Q8K243 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim68Q8K243 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim68Q8K243 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim68Q8K243 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim68Q8K243 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim68Q8K243 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.43■□□□□ 0.54
Trim68Q8K243 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim68Q8K243 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim68Q8K243 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim68Q8K243 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim68Q8K243 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim68Q8K243 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim68Q8K243 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.42■□□□□ 0.54
Trim68Q8K243 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim68Q8K243 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.42■□□□□ 0.54
Trim68Q8K243 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim68Q8K243 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.41■□□□□ 0.54
Trim68Q8K243 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim68Q8K243 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim68Q8K243 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim68Q8K243 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim68Q8K243 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim68Q8K243 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.4■□□□□ 0.54
Trim68Q8K243 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.4■□□□□ 0.54
Trim68Q8K243 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 Mir1668-201ENSMUST00000184114 107 ntBASIC18.4■□□□□ 0.54
Trim68Q8K243 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim68Q8K243 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim68Q8K243 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim68Q8K243 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim68Q8K243 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim68Q8K243 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim68Q8K243 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim68Q8K243 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim68Q8K243 Gm7213-201ENSMUST00000215977 950 ntBASIC18.39■□□□□ 0.53
Trim68Q8K243 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim68Q8K243 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms