Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx30Q8CE50 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx30Q8CE50 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Mir5122-201ENSMUST00000175004 89 ntBASIC17.54■□□□□ 0.4
Snx30Q8CE50 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.54■□□□□ 0.4
Snx30Q8CE50 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.54■□□□□ 0.4
Snx30Q8CE50 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Snx30Q8CE50 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.54■□□□□ 0.4
Snx30Q8CE50 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx30Q8CE50 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx30Q8CE50 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Snx30Q8CE50 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx30Q8CE50 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.51■□□□□ 0.39
Snx30Q8CE50 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.51■□□□□ 0.39
Snx30Q8CE50 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.51■□□□□ 0.39
Snx30Q8CE50 Odf3b-204ENSMUST00000227834 930 ntBASIC17.51■□□□□ 0.39
Snx30Q8CE50 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.51■□□□□ 0.39
Snx30Q8CE50 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Snx30Q8CE50 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx30Q8CE50 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms