Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a6Q8C6K9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a6Q8C6K9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a6Q8C6K9 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Gm5264-201ENSMUST00000190584 848 ntBASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a6Q8C6K9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col6a6Q8C6K9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col6a6Q8C6K9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms